This class computes the Hoover instances. More...

#include <otbHooverInstanceFilter.h>

Inheritance diagram for otb::HooverInstanceFilter< TLabelMap >:

Collaboration diagram for otb::HooverInstanceFilter< TLabelMap >:

Public Types
typedef LabelObjectType::AttributesValueType	AttributesValueType
typedef LabelObjectType::AttributeType	AttributeType
typedef itk::VariableLengthVector < CoefficientType >	CardinalVector
typedef unsigned long	CoefficientType
typedef itk::SmartPointer < const Self >	ConstPointer
typedef DataObject::Pointer	DataObjectPointer
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef DataObjectPointerArray::size_type	DataObjectPointerArraySizeType
typedef LabelMapType::RegionType	ImageRegionType
typedef LabelObjectType::IndexType	IndexType
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef TLabelMap	InputImageType
typedef LabelMapType::Pointer	LabelMapPointer
typedef TLabelMap	LabelMapType
typedef LabelMapType::LabelObjectContainerType	LabelObjectContainerType
typedef LabelObjectContainerType::const_iterator	LabelObjectContainerTypeConstIterator
typedef LabelMapType::LabelObjectType	LabelObjectType
typedef LabelObjectType::LabelType	LabelType
typedef LabelMapType::LabelVectorType	LabelVectorType
typedef LabelObjectType::LineContainerType	LineContainerType
typedef itk::VariableSizeMatrix < CoefficientType >	MatrixType
typedef std::vector < LabelObjectType * >	ObjectVectorType
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef Superclass::OutputImagePixelType	OutputImagePixelType
typedef Superclass::OutputImagePointer	OutputImagePointer
typedef Superclass::OutputImageRegionType	OutputImageRegionType
typedef Superclass::OutputImageType	OutputImageType
typedef InputImageType::PixelType	PixelType
typedef itk::SmartPointer< Self >	Pointer
typedef std::set< CoefficientType >	RegionSetType
typedef InputImageType::RegionType	RegionType
typedef HooverInstanceFilter	Self
typedef itk::InPlaceLabelMapFilter < TLabelMap >	Superclass
typedef TLabelMap	TOutputImage

Public Member Functions
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
bool	CanRunInPlace () const
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual void	DebugOff () const
virtual void	DebugOn () const
virtual void	Delete ()
void	EnlargeOutputRequestedRegion (DataObject *)
void	GenerateInputRequestedRegion ()
virtual const bool &	GetAbortGenerateData ()
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
const LabelMapType *	GetGroundTruthLabelMap ()
virtual MatrixType	GetHooverMatrix ()
virtual bool	GetInPlace ()
const InputImageType *	GetInput (void)
const InputImageType *	GetInput (unsigned int idx)
DataObjectPointerArray &	GetInputs ()
const LabelMapType *	GetMachineSegmentationLabelMap ()
virtual AttributesValueType	GetMeanRA ()
virtual AttributesValueType	GetMeanRC ()
virtual AttributesValueType	GetMeanRF ()
virtual AttributesValueType	GetMeanRM ()
virtual AttributesValueType	GetMeanRN ()
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
MultiThreader *	GetMultiThreader ()
virtual const char *	GetNameOfClass () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual const int &	GetNumberOfThreads ()
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
OutputImageType *	GetOutput (void)
OutputImageType *	GetOutput (unsigned int idx)
LabelMapType *	GetOutputGroundTruthLabelMap ()
LabelMapType *	GetOutputMachineSegmentationLabelMap ()
DataObjectPointerArray &	GetOutputs ()
virtual const float &	GetProgress ()
virtual int	GetReferenceCount () const
virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual bool	GetReleaseDataFlag () const
virtual double	GetThreshold ()
virtual bool	GetUseExtendedAttributes ()
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
virtual void	GraftOutput (DataObject *output)
bool	HasObserver (const EventObject &event) const
virtual void	InPlaceOff ()
virtual void	InPlaceOn ()
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual DataObjectPointer	MakeOutput (unsigned int idx)
virtual void	Modified () const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
virtual void	PrepareOutputs ()
void	Print (std::ostream &os, Indent indent=0) const
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	PushBackInput (const InputImageType *image)
virtual void	PushFrontInput (const InputImageType *image)
virtual void	Register () const
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
void	ReleaseDataFlagOff ()
void	ReleaseDataFlagOn ()
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
void	SetDebug (bool debugFlag) const
void	SetGroundTruthLabelMap (const LabelMapType *gt)
virtual void	SetHooverMatrix (MatrixType _arg)
virtual void	SetInPlace (bool _arg)
virtual void	SetInput (const InputImageType *image)
virtual void	SetInput (unsigned int, const TLabelMap *image)
void	SetMachineSegmentationLabelMap (const LabelMapType *ms)
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetNumberOfThreads (int _arg)
virtual void	SetProgress (float _arg)
virtual void	SetReferenceCount (int)
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual void	SetReleaseDataFlag (bool flag)
virtual void	SetThreshold (double _arg)
virtual void	SetUseExtendedAttributes (bool _arg)
virtual void	UnRegister () const
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)

Static Public Member Functions
static void	BreakOnError ()
static AttributeType	GetAttributeFromName (const std::string &name)
static bool	GetGlobalWarningDisplay ()
static std::string	GetNameFromAttribute (const AttributeType &a)
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalWarningDisplay (bool flag)

Static Public Attributes
static const AttributeType	ATTRIBUTE_CD = 100
static const AttributeType	ATTRIBUTE_M = 103
static const AttributeType	ATTRIBUTE_N = 104
static const AttributeType	ATTRIBUTE_OS = 101
static const AttributeType	ATTRIBUTE_RA = 107
static const AttributeType	ATTRIBUTE_RC = 105
static const AttributeType	ATTRIBUTE_RF = 106
static const AttributeType	ATTRIBUTE_RM = 108
static const AttributeType	ATTRIBUTE_RN = 109
static const AttributeType	ATTRIBUTE_US = 102
static const unsigned int	InputImageDimension
static const unsigned int	OutputImageDimension

Protected Types
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension)>	InputToOutputRegionCopierType
typedef int	InternalReferenceCountType
typedef Superclass::LabelObjectContainerConstIterator	LabelObjectContainerConstIterator
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension)>	OutputToInputRegionCopierType

Protected Member Functions
	HooverInstanceFilter ()
	~HooverInstanceFilter ()
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
virtual void	AfterThreadedGenerateData ()
virtual void	AllocateOutputs ()
virtual void	BeforeThreadedGenerateData ()
virtual void	CacheInputReleaseDataFlags ()
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
virtual void	GenerateData ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
const DataObject *	GetInput (unsigned int idx) const
virtual InputImageType *	GetLabelMap ()
virtual const unsigned int &	GetNumberOfRequiredInputs ()
virtual const unsigned int &	GetNumberOfRequiredOutputs ()
const DataObject *	GetOutput (unsigned int idx) const
virtual void	PrintHeader (std::ostream &os, Indent indent) const
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual void	PropagateResetPipeline ()
void	PushBackInput (const DataObject *input)
void	PushFrontInput (const DataObject *input)
virtual void	ReleaseInputs ()
virtual void	RemoveInput (DataObject *input)
virtual void	RemoveOutput (DataObject *output)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetNthInput (unsigned int num, DataObject *input)
virtual void	SetNthOutput (unsigned int num, DataObject *output)
void	SetNumberOfInputs (unsigned int num)
void	SetNumberOfOutputs (unsigned int num)
virtual void	SetNumberOfRequiredInputs (unsigned int _arg)
virtual void	SetNumberOfRequiredOutputs (unsigned int _arg)
virtual int	SplitRequestedRegion (int i, int num, OutputImageRegionType &splitRegion)
virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, int threadId)
virtual void	ThreadedProcessLabelObject (LabelObjectType *labelObject)
virtual void	ThreadedProcessLabelObject (LabelObjectType *labelObject)

Static Protected Member Functions
static ITK_THREAD_RETURN_TYPE	ThreaderCallback (void *arg)

Protected Attributes
FastMutexLock::Pointer	m_LabelObjectContainerLock
TimeStamp	m_OutputInformationMTime
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock
bool	m_Updating

Private Attributes
CardinalVector	m_CardRegGT
CardinalVector	m_CardRegMS
MatrixType	m_HooverMatrix
LabelVectorType	m_LabelsGT
AttributesValueType	m_MeanRA
AttributesValueType	m_MeanRC
AttributesValueType	m_MeanRF
AttributesValueType	m_MeanRM
AttributesValueType	m_MeanRN
unsigned long	m_NumberOfRegionsGT
unsigned long	m_NumberOfRegionsMS
double	m_Threshold
bool	m_UseExtendedAttributes

Detailed Description

template<class TLabelMap>
class otb::HooverInstanceFilter< TLabelMap >

This class computes the Hoover instances.

The Hoover instances are computed from two segmentations : ground truth (GT) and machine segmentation (MS); and a Hoover confusion matrix. It is intended to work with AttributesMapLabelObject, where the Hoover scores will be stored. The different instances are :

correct detection (a GT region paired with a MS region)
under segmentation (a MS region paired with a set of GT regions)
over segmentation (a GT region paired with a set of MS regions)
missed (a GT region that doesn't belong to any of the previous instances)
noise (a MS region that doesn't belong to any of the previous instances)

The corresponding scores are :

RC : for correct detection
RF : for over segmentation
RA : for under segmentation
RM : for missed regions (only for GT)
RN : for noise regions (only for MS)

These Hoover scores that are stored in the label maps are computed between 0 (if the region doesn't belong to this kind of instance) and 1.

If the user wants to which region labels have been paired, he can set the flag UseExtendedAttributes. The extended attributes contain the labels that have been paired in Hoover instances:

ATTRIBUTE_CD (correct detection) : label of the corresponding region in the other segmentation
ATTRIBUTE_OS[_x] (over segmentation) : label of the opposite over segmented region in GT / labels of the corresponding regions of MS
ATTRIBUTE_US[_x] (under segmentation) : labels of the corresponding regions of GT / label of the under segmentated region of MS
ATTRIBUTE_M (missed) : missed region own label (in GT)
ATTRIBUTE_N (noise) : noise region own label (in MS)

These attributes are handled in a different way than the Hoover scores. The simple presence of an extended attribute in a given region has a meaning, regardless of its value. It is assumed that its value always corresponds to an existing region label. This is why these extended attributes are not reset but removed before computing Hoover instances. (see Hoover et al., "An experimental comparison of range image segmentation algorithms", IEEE PAMI vol. 18, no. 7, July 1996)

See also:: HooverMatrixFilter

Definition at line 68 of file otbHooverInstanceFilter.h.

Member Typedef Documentation

template<class TLabelMap >

typedef LabelObjectType::AttributesValueType otb::HooverInstanceFilter< TLabelMap >::AttributesValueType

Definition at line 90 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef LabelObjectType::AttributeType otb::HooverInstanceFilter< TLabelMap >::AttributeType

Definition at line 89 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef itk::VariableLengthVector<CoefficientType> otb::HooverInstanceFilter< TLabelMap >::CardinalVector

Definition at line 101 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef unsigned long otb::HooverInstanceFilter< TLabelMap >::CoefficientType

Definition at line 98 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef itk::SmartPointer<const Self> otb::HooverInstanceFilter< TLabelMap >::ConstPointer

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 76 of file otbHooverInstanceFilter.h.

typedef DataObject::Pointer itk::ImageSource< TLabelMap >::DataObjectPointer

inherited

Smart Pointer type to a DataObject.

Reimplemented from itk::ProcessObject.

Definition at line 62 of file itkImageSource.h.

typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray

inherited

STL Array of SmartPointers to DataObjects

Definition at line 103 of file itkProcessObject.h.

typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType

inherited

Size type of an std::vector

Definition at line 112 of file itkProcessObject.h.

template<class TLabelMap >

typedef LabelMapType::RegionType otb::HooverInstanceFilter< TLabelMap >::ImageRegionType

Definition at line 92 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef LabelObjectType::IndexType otb::HooverInstanceFilter< TLabelMap >::IndexType

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 95 of file otbHooverInstanceFilter.h.

typedef InputImageType::ConstPointer itk::InPlaceLabelMapFilter< TLabelMap >::InputImageConstPointer

inherited

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 92 of file itkInPlaceLabelMapFilter.h.

typedef InputImageType::PixelType itk::InPlaceLabelMapFilter< TLabelMap >::InputImagePixelType

inherited

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 94 of file itkInPlaceLabelMapFilter.h.

typedef InputImageType::Pointer itk::InPlaceLabelMapFilter< TLabelMap >::InputImagePointer

inherited

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 91 of file itkInPlaceLabelMapFilter.h.

typedef InputImageType::RegionType itk::InPlaceLabelMapFilter< TLabelMap >::InputImageRegionType

inherited

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 93 of file itkInPlaceLabelMapFilter.h.

typedef TLabelMap itk::InPlaceLabelMapFilter< TLabelMap >::InputImageType

inherited

Some convenient typedefs.

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 90 of file itkInPlaceLabelMapFilter.h.

typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension)> itk::ImageToImageFilter< TLabelMap , TLabelMap >::InputToOutputRegionCopierType

protectedinherited

Typedef for the region copier function object that converts an input region to an output region.

Definition at line 161 of file itkImageToImageFilter.h.

typedef int itk::LightObject::InternalReferenceCountType

protectedinherited

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 137 of file itkLightObject.h.

template<class TLabelMap >

typedef LabelMapType::Pointer otb::HooverInstanceFilter< TLabelMap >::LabelMapPointer

Definition at line 85 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef TLabelMap otb::HooverInstanceFilter< TLabelMap >::LabelMapType

Some convenient typedefs.

Definition at line 81 of file otbHooverInstanceFilter.h.

typedef Superclass::LabelObjectContainerConstIterator itk::InPlaceLabelMapFilter< TLabelMap >::LabelObjectContainerConstIterator

protectedinherited

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 166 of file itkInPlaceLabelMapFilter.h.

template<class TLabelMap >

typedef LabelMapType::LabelObjectContainerType otb::HooverInstanceFilter< TLabelMap >::LabelObjectContainerType

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 86 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef LabelObjectContainerType::const_iterator otb::HooverInstanceFilter< TLabelMap >::LabelObjectContainerTypeConstIterator

Definition at line 87 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef LabelMapType::LabelObjectType otb::HooverInstanceFilter< TLabelMap >::LabelObjectType

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 88 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef LabelObjectType::LabelType otb::HooverInstanceFilter< TLabelMap >::LabelType

Definition at line 96 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef LabelMapType::LabelVectorType otb::HooverInstanceFilter< TLabelMap >::LabelVectorType

Definition at line 91 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef LabelObjectType::LineContainerType otb::HooverInstanceFilter< TLabelMap >::LineContainerType

Definition at line 94 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef itk::VariableSizeMatrix<CoefficientType> otb::HooverInstanceFilter< TLabelMap >::MatrixType

Definition at line 99 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef std::vector<LabelObjectType*> otb::HooverInstanceFilter< TLabelMap >::ObjectVectorType

Definition at line 103 of file otbHooverInstanceFilter.h.

typedef OutputImageType::ConstPointer itk::LabelMapFilter< TLabelMap , TLabelMap >::OutputImageConstPointer

inherited

Definition at line 77 of file itkLabelMapFilter.h.

typedef Superclass::OutputImagePixelType itk::InPlaceLabelMapFilter< TLabelMap >::OutputImagePixelType

inherited

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 87 of file itkInPlaceLabelMapFilter.h.

typedef Superclass::OutputImagePointer itk::InPlaceLabelMapFilter< TLabelMap >::OutputImagePointer

inherited

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 85 of file itkInPlaceLabelMapFilter.h.

typedef Superclass::OutputImageRegionType itk::InPlaceLabelMapFilter< TLabelMap >::OutputImageRegionType

inherited

Superclass typedefs.

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 86 of file itkInPlaceLabelMapFilter.h.

typedef Superclass::OutputImageType itk::InPlaceLabelMapFilter< TLabelMap >::OutputImageType

inherited

Superclass typedefs.

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 81 of file itkInPlaceLabelMapFilter.h.

typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension)> itk::ImageToImageFilter< TLabelMap , TLabelMap >::OutputToInputRegionCopierType

protectedinherited

Typedef for the region copier function object that converts an output region to an input region.

Definition at line 166 of file itkImageToImageFilter.h.

typedef InputImageType::PixelType itk::InPlaceLabelMapFilter< TLabelMap >::PixelType

inherited

Definition at line 97 of file itkInPlaceLabelMapFilter.h.

template<class TLabelMap >

typedef itk::SmartPointer<Self> otb::HooverInstanceFilter< TLabelMap >::Pointer

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 75 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef std::set<CoefficientType> otb::HooverInstanceFilter< TLabelMap >::RegionSetType

Definition at line 102 of file otbHooverInstanceFilter.h.

typedef InputImageType::RegionType itk::InPlaceLabelMapFilter< TLabelMap >::RegionType

inherited

Definition at line 99 of file itkInPlaceLabelMapFilter.h.

template<class TLabelMap >

typedef HooverInstanceFilter otb::HooverInstanceFilter< TLabelMap >::Self

Standard class typedefs.

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 73 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

typedef itk::InPlaceLabelMapFilter< TLabelMap > otb::HooverInstanceFilter< TLabelMap >::Superclass

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 74 of file otbHooverInstanceFilter.h.

typedef TLabelMap itk::InPlaceLabelMapFilter< TLabelMap >::TOutputImage

inherited

Definition at line 101 of file itkInPlaceLabelMapFilter.h.

Constructor & Destructor Documentation

template<class TLabelMap >

otb::HooverInstanceFilter< TLabelMap >::HooverInstanceFilter ( )

protected

Constructor

Definition at line 30 of file otbHooverInstanceFilter.txx.

template<class TLabelMap >

otb::HooverInstanceFilter< TLabelMap >::~HooverInstanceFilter ( )

inlineprotected

Definition at line 206 of file otbHooverInstanceFilter.h.

Member Function Documentation

virtual void itk::ProcessObject::AbortGenerateDataOff ( )

virtualinherited

virtual void itk::ProcessObject::AbortGenerateDataOn ( )

virtualinherited

Turn on and off the AbortGenerateData flag.

void itk::ProcessObject::AddInput ( DataObject * input )

protectedvirtualinherited

Adds an input to the first null position in the input list. Expands the list memory if necessary

Reimplemented in otb::ObjectDetectionClassifier< TInputImage, TOutputVectorData, TLabel, TFunctionPrecision, TCoordRep >, otb::DescriptorsListSampleGenerator< TInputImage, TVectorData, TListSample, TLabelListSample, TOutputPrecision, TCoordRep >, otb::PersistentDescriptorsListSampleGenerator< TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample >, and otb::PersistentObjectDetectionClassifier< TInputImage, TOutputVectorData, TLabel, TFunctionType >.

Definition at line 144 of file itkProcessObject.cxx.

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *	cmd
	)

inherited

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

Definition at line 389 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), itk::ProgressAccumulator::RegisterInternalFilter(), otb::ImageFileWriter< TInputImage >::Update(), and otb::WriterWatcherBase::WriterWatcherBase().

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *	cmd
	)		const

inherited

Definition at line 401 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

void itk::ProcessObject::AddOutput ( DataObject * output )

protectedvirtualinherited

Adds an output to the first null position in the output list. Expands the list memory if necessary

Definition at line 390 of file itkProcessObject.cxx.

References itk::DataObject::ConnectSource().

template<class TLabelMap >

void otb::HooverInstanceFilter< TLabelMap >::AfterThreadedGenerateData ( void )

protectedvirtual

Actions :

Compute Hoover instances

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 285 of file otbHooverInstanceFilter.txx.

References otbDebugMacro.

template<class TLabelMap >

void otb::HooverInstanceFilter< TLabelMap >::AllocateOutputs ( )

protectedvirtual

Re implement the allocate output method to handle the second output correctly

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 99 of file otbHooverInstanceFilter.txx.

References NULL.

template<class TLabelMap >

void otb::HooverInstanceFilter< TLabelMap >::BeforeThreadedGenerateData ( void )

protectedvirtual

Actions:

Check matrix size
Init cardinalities lists
Fill cardinalities list for MS (GT is done by ThreadedProcessLabelObject)

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 163 of file otbHooverInstanceFilter.txx.

References otbWarningMacro.

void itk::LightObject::BreakOnError ( )

staticinherited

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

Definition at line 149 of file itkLightObject.cxx.

void itk::ProcessObject::CacheInputReleaseDataFlags ( )

protectedvirtualinherited

Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().

Definition at line 1050 of file itkProcessObject.cxx.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::CallCopyInputRegionToOutputRegion	(	OutputImageRegionType &	destRegion,
		const InputImageRegionType &	srcRegion
	)

protectedvirtualinherited

This function calls the actual region copier to do the mapping from input image space to output image space. It uses a Function object used for dispatching to various routines to copy an input region (start index and size) to an output region. For most filters, this is a trivial copy because most filters require the input dimension to match the output dimension. However, some filters like itk::UnaryFunctorImageFilter can support output images of a higher dimension that the input.

This function object is used by the default implementation of GenerateOutputInformation(). It can also be used in routines like ThreadedGenerateData() where a filter may need to map an input region to an output region.

The default copier uses a "dispatch pattern" to call one of three overloaded functions depending on whether the input and output images are the same dimension, the input is a higher dimension that the output, or the input is of a lower dimension than the output. The use of an overloaded function is required for proper compilation of the various cases.

For the latter two cases, trivial implementations are used. If the input image is a higher dimension than the output, the first portion of the input region is copied to the output region. If the input region is a lower dimension than the output, the input region information is copied into the first portion of the output region and the rest of the output region is set to zero.

If a filter needs a different default behavior, it can override this method.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::CallCopyOutputRegionToInputRegion	(	InputImageRegionType &	destRegion,
		const OutputImageRegionType &	srcRegion
	)

protectedvirtualinherited

This function calls the actual region copier to do the mapping from output image space to input image space. It uses a Function object used for dispatching to various routines to copy an output region (start index and size) to an input region. For most filters, this is a trivial copy because most filters require the input dimension to match the output dimension. However, some filters like itk::ExtractImageFilter can support output images of a lower dimension that the input.

This function object can be used by GenerateOutputInformation() to copy the input LargestPossibleRegion to the output LargestPossibleRegion and can also be used in GenerateData or ThreadedGenerateData() where a filter may need to map an output region to an input region.

The default copier uses a "dispatch pattern" to call one of three overloaded functions depending on whether the input and output images are the same dimension, the input is a higher dimension that the output, or the input is of a lower dimension than the output. The use of an overloaded function is required for proper compilation of the various cases.

For the latter two cases, trivial implementations are used. If the input image is a higher dimension than the output, the output region information is copied into the first portion of the input region and the rest of the input region is set to zero. If the input region is a lower dimension than the output, the first portion of the output region is copied to the input region.

If a filter needs a different default behavior, it can override this method. The ExtractImageFilter overrides this function object so that if the input image is a higher dimension than the output image, the filter can control "where" in the input image the output subimage is extracted (as opposed to mapping to first few dimensions of the input).

bool itk::InPlaceLabelMapFilter< TLabelMap >::CanRunInPlace ( ) const

inlineinherited

Can the filter run in place? To do so, the filter's first input and output must have the same dimension and pixel type. This method can be used in conjunction with the InPlace ivar to determine whether a particular use of the filter is really running in place. Some filters may be able to optimize their operation if the InPlace is true and CanRunInPlace is true.

Definition at line 119 of file itkInPlaceLabelMapFilter.h.

template<class TLabelMap >

virtual::itk::LightObject::Pointer otb::HooverInstanceFilter< TLabelMap >::CreateAnother ( void ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

void itk::Object::DebugOff ( ) const

virtualinherited

Turn debugging output off.

Definition at line 253 of file itkObject.cxx.

void itk::Object::DebugOn ( ) const

virtualinherited

Turn debugging output on.

Definition at line 242 of file itkObject.cxx.

void itk::LightObject::Delete ( )

virtualinherited

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

Delete a itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C++ delete method will not work with reference counting.

Definition at line 88 of file itkLightObject.cxx.

void itk::LabelMapFilter< TLabelMap , TLabelMap >::EnlargeOutputRequestedRegion ( DataObject * )

virtualinherited

LabelMapFilter will produce the entire output.

Reimplemented from itk::ProcessObject.

virtual void itk::ImageSource< TLabelMap >::GenerateData ( void )

protectedvirtualinherited

A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.

See also:: ThreadedGenerateData()

Reimplemented from itk::ProcessObject.

void itk::LabelMapFilter< TLabelMap , TLabelMap >::GenerateInputRequestedRegion ( void )

virtualinherited

LabelMapFilter requires the entire input to be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().

Reimplemented from itk::ImageToImageFilter< TLabelMap, TLabelMap >.

void itk::ProcessObject::GenerateOutputInformation ( void )

protectedvirtualinherited

Generate the information decribing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.

Default implementation - copy information from first input to all outputs

Examples:: Fusion/BayesianFusionImageFilter.cxx.

Definition at line 1095 of file itkProcessObject.cxx.

Referenced by main().

void itk::ProcessObject::GenerateOutputRequestedRegion ( DataObject * output )

protectedvirtualinherited

Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly.

Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type.

By default we set all the output requested regions to be the same.

Reimplemented in itk::watershed::Segmenter< TInputImage >, itk::watershed::Segmenter< InputImageType >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::SegmentTreeGenerator< ScalarType >, itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>, itk::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, and itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >.

Definition at line 846 of file itkProcessObject.cxx.

virtual const bool& itk::ProcessObject::GetAbortGenerateData ( )

virtualinherited

Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

Referenced by itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback().

template<class TLabelMap >

static AttributeType otb::HooverInstanceFilter< TLabelMap >::GetAttributeFromName ( const std::string & name )

inlinestatic

Definition at line 160 of file otbHooverInstanceFilter.h.

Command * itk::Object::GetCommand ( unsigned long tag )

inherited

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

Definition at line 414 of file itkObject.cxx.

References itk::Object::GetCommand(), and NULL.

Referenced by itk::Object::GetCommand().

bool itk::Object::GetDebug ( ) const

inherited

Get the value of the debug flag.

Definition at line 264 of file itkObject.cxx.

Referenced by otb::ogr::ImageReference< double >::GetDebug().

bool itk::Object::GetGlobalWarningDisplay ( )

staticinherited

Get the value of the global debug output control flag.

Definition at line 381 of file itkObject.cxx.

template<class TLabelMap >

const TLabelMap * otb::HooverInstanceFilter< TLabelMap >::GetGroundTruthLabelMap ( )

Get the input ground truth label map

Definition at line 68 of file otbHooverInstanceFilter.txx.

template<class TLabelMap >

virtual MatrixType otb::HooverInstanceFilter< TLabelMap >::GetHooverMatrix ( )

virtual

virtual bool itk::InPlaceLabelMapFilter< TLabelMap >::GetInPlace ( )

virtualinherited

const InputImageType* itk::ImageToImageFilter< TLabelMap , TLabelMap >::GetInput ( void )

inherited

const InputImageType* itk::ImageToImageFilter< TLabelMap , TLabelMap >::GetInput ( unsigned int idx )

inherited

Method used internally for getting an input.

Reimplemented from itk::ProcessObject.

const DataObject * itk::ProcessObject::GetInput ( unsigned int idx ) const

protectedinherited

Reimplemented in otb::AngularProjectionSetImageFilter< TInputImage, TOutputImage, TAngleList, TPrecision >, otb::SparseUnmixingImageFilter< TInputImage, TOutputImage, VNbInputImage, TPrecision, TMotherWaveletOperator >, otb::AngularProjectionImageFilter< TInputImage, TOutputImage, TAngleArray, TPrecision >, otb::LabeledSampleLocalizationGenerator< TVectorData >, otb::ConcatenateVectorDataFilter< TVectorData >, itk::MeshToMeshFilter< TInputMesh, TOutputMesh >, and itk::MeshToMeshFilter< TInput, TOutput >.

Definition at line 482 of file itkProcessObject.cxx.

References NULL.

DataObjectPointerArray& itk::ProcessObject::GetInputs ( )

inlineinherited

Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc.

Definition at line 108 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

virtual InputImageType* itk::InPlaceLabelMapFilter< TLabelMap >::GetLabelMap ( )

inlineprotectedvirtualinherited

Return the output label collection image, instead of the input as in the default implementation

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 160 of file itkInPlaceLabelMapFilter.h.

template<class TLabelMap >

const TLabelMap * otb::HooverInstanceFilter< TLabelMap >::GetMachineSegmentationLabelMap ( )

Get the input machine segmentation label map

Definition at line 76 of file otbHooverInstanceFilter.txx.

template<class TLabelMap >

virtual AttributesValueType otb::HooverInstanceFilter< TLabelMap >::GetMeanRA ( )

virtual

template<class TLabelMap >

virtual AttributesValueType otb::HooverInstanceFilter< TLabelMap >::GetMeanRC ( )

virtual

Get the average scores (after filter update)

template<class TLabelMap >

virtual AttributesValueType otb::HooverInstanceFilter< TLabelMap >::GetMeanRF ( )

virtual

template<class TLabelMap >

virtual AttributesValueType otb::HooverInstanceFilter< TLabelMap >::GetMeanRM ( )

virtual

template<class TLabelMap >

virtual AttributesValueType otb::HooverInstanceFilter< TLabelMap >::GetMeanRN ( )

virtual

MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void )

inherited

Returns:: A reference to this objects MetaDataDictionary.

Warning:: This reference may be changed.

Reimplemented in otb::ImageMetadataInterfaceBase.

Definition at line 532 of file itkObject.cxx.

References NULL.

const MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void ) const

inherited

Returns:: A constant reference to this objects MetaDataDictionary.

Reimplemented in otb::ImageMetadataInterfaceBase.

Definition at line 543 of file itkObject.cxx.

References NULL.

unsigned long itk::Object::GetMTime ( void ) const

virtualinherited

Return this objects modified time.

Return the modification for this object.

Definition at line 286 of file itkObject.cxx.

Referenced by itk::DeformationFieldSource< TOutputImage >::GetMTime(), itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >::GetMTime(), itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::GetMTime(), itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< TDimension >::GetMTime(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime(), otb::Function::NoStretchRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), itk::VTKImageExportBase::PipelineModifiedCallback(), and itk::ProcessObject::UpdateOutputInformation().

MultiThreader* itk::ProcessObject::GetMultiThreader ( )

inlineinherited

Return the multithreader used by this class.

Definition at line 280 of file itkProcessObject.h.

template<class TLabelMap >

static std::string otb::HooverInstanceFilter< TLabelMap >::GetNameFromAttribute ( const AttributeType & a )

inlinestatic

Definition at line 141 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

virtual const char* otb::HooverInstanceFilter< TLabelMap >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfInputs ( ) const

inlineinherited

Get the size of the input vector. This is merely the size of the input vector, not the number of inputs that have valid DataObject's assigned. Use GetNumberOfValidRequiredInputs() to determine how many inputs are non-null.

Definition at line 118 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfOutputs ( ) const

inlineinherited

Reimplemented in otb::ImageSeriesFileReaderBase< TImage, TInternalImage >, otb::ImageSeriesFileReaderBase< VectorImage< TPixel, 2 >, VectorImage< TInternalPixel, 2 > >, otb::ImageSeriesFileReaderBase< Image< TPixel, 2 >, Image< TInternalPixel, 2 > >, and otb::ImageSeriesFileReaderBase< Image< TPixel, 2 >, VectorImage< TInternalPixel, 2 > >.

Definition at line 135 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredInputs ( )

protectedvirtualinherited

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredOutputs ( )

protectedvirtualinherited

virtual const int& itk::ProcessObject::GetNumberOfThreads ( )

virtualinherited

Referenced by itk::BSplineScatteredDataPointSetToImageFilter< TInputPointSet, TOutputImage >::SplitRequestedRegion().

ProcessObject::DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfValidRequiredInputs ( ) const

virtualinherited

Get the number of valid inputs. This is the number of non-null entries in the input vector in the first NumberOfRequiredInputs slots. This method is used to determine whether the necessary required inputs have been set. Subclasses of ProcessObject may override this implementation if the required inputs are not the first slots in input vector.

Get the number of specified inputs

Reimplemented in itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >, and itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 112 of file itkProcessObject.cxx.

OutputImageType* itk::ImageSource< TLabelMap >::GetOutput ( void )

inherited

Get the output data of this process object. The output of this function is not valid until an appropriate Update() method has been called, either explicitly or implicitly. Both the filter itself and the data object have Update() methods, and both methods update the data. Here are three ways to use GetOutput() and make sure the data is valid. In these examples, image is a pointer to some Image object, and the particular ProcessObjects involved are filters. The same examples apply to non-image (e.g. Mesh) data as well.

anotherFilter->SetInput( someFilter->GetOutput() );

anotherFilter->Update();

In this situation, someFilter and anotherFilter are said to constitute a pipeline.

image = someFilter->GetOutput();

image->Update();

someFilter->Update();

image = someFilter->GetOutput();

(In the above example, the two lines of code can be in either order.)

Note that Update() is not called automatically except within a pipeline as in the first example. When streaming (using a StreamingImageFilter) is activated, it may be more efficient to use a pipeline than to call Update() once for each filter in turn.

For an image, the data generated is for the requested Region, which can be set using ImageBase::SetRequestedRegion(). By default, the largest possible region is requested.

For Filters which have multiple outputs of different types, the GetOutput() method assumes the output is of OutputImageType. For the GetOutput(unsigned int) method, a dynamic_cast is performed incase the filter has outputs of different types or image types. Derived classes should have names get methods for these outputs.

OutputImageType* itk::ImageSource< TLabelMap >::GetOutput ( unsigned int idx )

inherited

Method used internally for getting an output.

Reimplemented from itk::ProcessObject.

const DataObject * itk::ProcessObject::GetOutput ( unsigned int idx ) const

protectedinherited

Definition at line 454 of file itkProcessObject.cxx.

References NULL.

template<class TLabelMap >

TLabelMap * otb::HooverInstanceFilter< TLabelMap >::GetOutputGroundTruthLabelMap ( )

Get the output ground truth label map

Definition at line 84 of file otbHooverInstanceFilter.txx.

template<class TLabelMap >

TLabelMap * otb::HooverInstanceFilter< TLabelMap >::GetOutputMachineSegmentationLabelMap ( )

Get the output machine segmentation label map

Definition at line 92 of file otbHooverInstanceFilter.txx.

DataObjectPointerArray& itk::ProcessObject::GetOutputs ( )

inlineinherited

Return an array with all the outputs of this process object. This is useful for tracing forward in the pipeline to contruct graphs etc.

Definition at line 133 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

virtual const float& itk::ProcessObject::GetProgress ( )

virtualinherited

Get the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution.

Referenced by itk::WatershedMiniPipelineProgressCommand::Execute(), otb::StreamingImageVirtualWriter< TInputImage >::ObserveSourceFilterProgress(), otb::ImageFileWriter< TInputImage >::ObserveSourceFilterProgress(), itk::LaplacianRecursiveGaussianImageFilter< TInputImage, TOutputImage >::ReportProgress(), and itk::XMLFilterWatcher::ShowProgress().

virtual int itk::LightObject::GetReferenceCount ( ) const

inlinevirtualinherited

Gets the reference count on this object.

Definition at line 105 of file itkLightObject.h.

virtual const bool& itk::ProcessObject::GetReleaseDataBeforeUpdateFlag ( )

virtualinherited

bool itk::ProcessObject::GetReleaseDataFlag ( ) const

virtualinherited

Definition at line 512 of file itkProcessObject.cxx.

template<class TLabelMap >

virtual double otb::HooverInstanceFilter< TLabelMap >::GetThreshold ( )

virtual

template<class TLabelMap >

virtual bool otb::HooverInstanceFilter< TLabelMap >::GetUseExtendedAttributes ( )

virtual

static void itk::Object::GlobalWarningDisplayOff ( )

inlinestaticinherited

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

Referenced by itk::OutputWindow::DisplayText(), itk::Win32OutputWindow::PromptText(), and itk::Win32OutputWindow::WndProc().

static void itk::Object::GlobalWarningDisplayOn ( )

inlinestaticinherited

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

virtual void itk::ImageSource< TLabelMap >::GraftNthOutput	(	unsigned int	idx,
		DataObject *	output
	)

virtualinherited

Graft the specified data object onto this ProcessObject's idx'th output. This is similar to the GraftOutput method except it allows you to specify which output is affected. The specified index must be a valid output number (less than ProcessObject::GetNumberOfOutputs()). See the GraftOutput for general usage information.

virtual void itk::ImageSource< TLabelMap >::GraftOutput ( DataObject * output )

virtualinherited

Graft the specified DataObject onto this ProcessObject's output. This method grabs a handle to the specified DataObject's bulk data to used as its output's own bulk data. It also copies the region ivars (RequestedRegion, BufferedRegion, LargestPossibleRegion) and meta-data (Spacing, Origin) from the specified data object into this filter's output data object. Most importantly, however, it leaves the Source ivar untouched so the original pipeline routing is intact. This method is used when a process object is implemented using a mini-pipeline which is defined in its GenerateData() method. The usage is:

        // setup the mini-pipeline to process the input to this filter
        firstFilterInMiniPipeline->SetInput( this->GetInput() );
   
        // setup the mini-pipeline to calculate the correct regions
        // and write to the appropriate bulk data block
        lastFilterInMiniPipeline->GraftOutput( this->GetOutput() );
    
        // execute the mini-pipeline
        lastFilterInMiniPipeline->Update();
    
        // graft the mini-pipeline output back onto this filter's output.
        // this is needed to get the appropriate regions passed back.
        this->GraftOutput( lastFilterInMiniPipeline->GetOutput() );

For proper pipeline execution, a filter using a mini-pipeline must implement the GenerateInputRequestedRegion(), GenerateOutputRequestedRegion(), GenerateOutputInformation() and EnlargeOutputRequestedRegion() methods as necessary to reflect how the mini-pipeline will execute (in other words, the outer filter's pipeline mechanism must be consistent with what the mini-pipeline will do).

bool itk::Object::HasObserver ( const EventObject & event ) const

inherited

Return true if an observer is registered for this event.

Definition at line 467 of file itkObject.cxx.

virtual void itk::InPlaceLabelMapFilter< TLabelMap >::InPlaceOff ( )

virtualinherited

virtual void itk::InPlaceLabelMapFilter< TLabelMap >::InPlaceOn ( )

virtualinherited

void itk::Object::InvokeEvent ( const EventObject & event )

inherited

Call Execute on all the Commands observing this event id.

Definition at line 446 of file itkObject.cxx.

Referenced by otb::Wrapper::Application::AddProcess(), itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback(), and itk::VTKImageExportBase::UpdateDataCallback().

void itk::Object::InvokeEvent ( const EventObject & event ) const

inherited

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

Definition at line 457 of file itkObject.cxx.

virtual DataObjectPointer itk::ImageSource< TLabelMap >::MakeOutput ( unsigned int idx )

virtualinherited

Make a DataObject of the correct type to used as the specified output. Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a SmartPointer to a DataObject. If a subclass of ImageSource has multiple outputs of different types, then that class must provide an implementation of MakeOutput().

Reimplemented from itk::ProcessObject.

void itk::Object::Modified ( void ) const

virtualinherited

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Make sure this object's modified time is greater than all others.

Definition at line 297 of file itkObject.cxx.

template<class TLabelMap >

static Pointer otb::HooverInstanceFilter< TLabelMap >::New ( )

static

Standard New method.

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::PopBackInput ( )

virtualinherited

Model a stack on the input list by providing a pop back

Reimplemented from itk::ProcessObject.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::PopFrontInput ( )

virtualinherited

Reimplemented from itk::ProcessObject.

void itk::ProcessObject::PrepareOutputs ( )

virtualinherited

An opportunity to deallocate a ProcessObject's bulk data storage. Some filters may wish to reuse existing bulk data storage to avoid unnecessary deallocation/allocation sequences. The default implementation calls Initialize() on each output. DataObject::Initialize() frees its bulk data by default.

Reimplemented in itk::WatershedImageFilter< TInputImage >, and otb::GeometriesSource.

Definition at line 864 of file itkProcessObject.cxx.

void itk::LightObject::Print	(	std::ostream &	os,
		Indent	indent = `0`
	)		const

inherited

Cause the object to print itself out.

Avoid DLL boundary problems. This function will be common to all itk objects. It just calls the header/self/trailer virtual print methods, which can be overriden by subclasses (any itk object).

Definition at line 135 of file itkLightObject.cxx.

References itk::Indent::GetNextIndent().

Referenced by itk::operator<<().

void itk::LightObject::PrintHeader	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtualinherited

Define a default print header for all objects.

Definition at line 320 of file itkLightObject.cxx.

bool itk::Object::PrintObservers	(	std::ostream &	os,
		Indent	indent
	)		const

protectedinherited

Definition at line 478 of file itkObject.cxx.

virtual void itk::InPlaceLabelMapFilter< TLabelMap >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtualinherited

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Chaining method to print an object's instance variables, as well as its superclasses.

Reimplemented from itk::ImageToImageFilter< TLabelMap, TLabelMap >.

void itk::LightObject::PrintTrailer	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtualinherited

Define a default print trailer for all objects.

Definition at line 331 of file itkLightObject.cxx.

void itk::ProcessObject::PropagateRequestedRegion ( DataObject * output )

virtualinherited

Send the requested region information back up the pipeline (to the filters that preceed this one).

 check flag to avoid executing forever if there is a loop

 Give the subclass a chance to indicate that it will provide
 more data then required for the output. This can happen, for
 example, when a source can only produce the whole output.
 Although this is being called for a specific output, the source
 may need to enlarge all outputs.

 Give the subclass a chance to define how to set the requested
 regions for each of its outputs, given this output's requested
 region.  The default implementation is to make all the output
 requested regions the same.  A subclass may need to override this
 method if each output is a different resolution.

 Give the subclass a chance to request a larger requested region on 
 the inputs. This is necessary when, for example, a filter
 requires more data at the "internal" boundaries to 
 produce the boundary values - such as an image filter that
 derives a new pixel value by applying some operation to a 
 neighborhood of surrounding original values.

 Now that we know the input requested region, propagate this
 through all the inputs.

Reimplemented in itk::VTKImageImport< TOutputImage >, and itk::StreamingImageFilter< TInputImage, TOutputImage >.

Definition at line 766 of file itkProcessObject.cxx.

void itk::ProcessObject::PropagateResetPipeline ( )

protectedvirtualinherited

Called to allocate the input array. Copies old inputs. Propagate a call to ResetPipeline() up the pipeline. Called only from DataObject.

Propagate the ResetPipeline call

Definition at line 631 of file itkProcessObject.cxx.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::PushBackInput ( const InputImageType * image )

virtualinherited

Push/Pop the input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.

The routines are useful for applications that need to process "rolling" sets of images. For instance, if an application has 10 images and they need to run a filter on images 1, 2, 3, 4, then run the filter on images 2, 3, 4, 5, then run the filter on images 3, 4, 5, 6, the application can accomplish this by popping an input off the front of the input list and push a new image onto the back of input list. Again, this only makes sense for filters that single type of input.

Other uses are also possible. For a single input filter, pushing and popping inputs allow the application to temporarily replace an input to a filter.

void itk::ImageToImageFilter< TLabelMap , TLabelMap >::PushBackInput ( const DataObject * input )

inlineprotectedvirtualinherited

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ProcessObject.

Definition at line 248 of file itkImageToImageFilter.h.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::PushFrontInput ( const InputImageType * image )

virtualinherited

void itk::ImageToImageFilter< TLabelMap , TLabelMap >::PushFrontInput ( const DataObject * input )

inlineprotectedvirtualinherited

Reimplemented from itk::ProcessObject.

Definition at line 250 of file itkImageToImageFilter.h.

void itk::Object::Register ( ) const

virtualinherited

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

Definition at line 309 of file itkObject.cxx.

Referenced by itk::ObjectFactoryBase::RegisterFactory().

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOff ( )

virtualinherited

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOn ( )

virtualinherited

void itk::ProcessObject::ReleaseDataFlagOff ( )

inlineinherited

Definition at line 256 of file itkProcessObject.h.

void itk::ProcessObject::ReleaseDataFlagOn ( )

inlineinherited

Definition at line 255 of file itkProcessObject.h.

template<class TLabelMap >

void otb::HooverInstanceFilter< TLabelMap >::ReleaseInputs ( )

protectedvirtual

Re implement the release input method to handle the second input correctly

Reimplemented from itk::InPlaceLabelMapFilter< TLabelMap >.

Definition at line 146 of file otbHooverInstanceFilter.txx.

void itk::Object::RemoveAllObservers ( )

inherited

Remove all observers .

Definition at line 435 of file itkObject.cxx.

void itk::ProcessObject::RemoveInput ( DataObject * input )

protectedvirtualinherited

Remove an input.

Removes the first occurence of the given OutputObject from the inputs to this ProcessObject. If it's the last object on the list, shortens the list.

Definition at line 173 of file itkProcessObject.cxx.

void itk::Object::RemoveObserver ( unsigned long tag )

inherited

Remove the observer with this tag value.

Definition at line 425 of file itkObject.cxx.

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), and otb::ImageFileWriter< TInputImage >::Update().

void itk::ProcessObject::RemoveOutput ( DataObject * output )

protectedvirtualinherited

Definition at line 294 of file itkProcessObject.cxx.

void itk::ProcessObject::ResetPipeline ( )

virtualinherited

Reset the pipeline. If an exception is thrown during an Update(), the pipeline may be in an inconsistent state. This method clears the internal state of the pipeline so Update() can be called.

Definition at line 621 of file itkProcessObject.cxx.

Referenced by itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback().

void itk::ProcessObject::RestoreInputReleaseDataFlags ( )

protectedvirtualinherited

Restore the cached input ReleaseDataFlags.

Definition at line 1075 of file itkProcessObject.cxx.

virtual void itk::ProcessObject::SetAbortGenerateData ( bool _arg )

virtualinherited

Set the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

void itk::Object::SetDebug ( bool debugFlag ) const

inherited

Set the value of the debug flag. A non-zero value turns debugging on.

Definition at line 275 of file itkObject.cxx.

void itk::Object::SetGlobalWarningDisplay ( bool val )

staticinherited

This is a global flag that controls whether any debug, warning or error messages are displayed.

Set the value of the global debug output control flag.

Definition at line 370 of file itkObject.cxx.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<class TLabelMap >

void otb::HooverInstanceFilter< TLabelMap >::SetGroundTruthLabelMap ( const LabelMapType * gt )

Set the ground truth label map

Definition at line 52 of file otbHooverInstanceFilter.txx.

template<class TLabelMap >

virtual void otb::HooverInstanceFilter< TLabelMap >::SetHooverMatrix ( MatrixType _arg )

virtual

virtual void itk::InPlaceLabelMapFilter< TLabelMap >::SetInPlace ( bool _arg )

virtualinherited

In place operation can be turned on and off. This only has an effect when the input and output image type match.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::SetInput ( const InputImageType * image )

virtualinherited

Set/Get the image input of this process object.

virtual void itk::ImageToImageFilter< TLabelMap , TLabelMap >::SetInput	(	unsigned	int,
		const TLabelMap *	image
	)

virtualinherited

Connect one of the operands for pixel-wise addition

template<class TLabelMap >

void otb::HooverInstanceFilter< TLabelMap >::SetMachineSegmentationLabelMap ( const LabelMapType * ms )

Set the machine segmentation label map

Definition at line 60 of file otbHooverInstanceFilter.txx.

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary & rhs )

inherited

Returns:: Set the MetaDataDictionary

Reimplemented in otb::ImageMetadataInterfaceBase.

Definition at line 554 of file itkObject.cxx.

References NULL.

Referenced by otb::VectorImage< TPixel, VImageDimension >::CopyInformation(), and otb::Image< TPixel, VImageDimension >::CopyInformation().

void itk::ProcessObject::SetNthInput	(	unsigned int	idx,
		DataObject *	input
	)

protectedvirtualinherited

Protected methods for setting inputs. Subclasses make use of them for setting input.

Set an Input of this filter. This method does Register()/UnRegister() manually to deal with the fact that smart pointers aren't around to do the reference counting.

Reimplemented in itk::ImageToVectorImageFilter< TInputImage >.

Definition at line 210 of file itkProcessObject.cxx.

void itk::ProcessObject::SetNthOutput	(	unsigned int	idx,
		DataObject *	output
	)

protectedvirtualinherited

Protected methods for setting outputs. Subclasses make use of them for getting output.

Set an output of this filter. This method specifically does not do a Register()/UnRegister() because of the desire to break the reference counting loop.

Definition at line 333 of file itkProcessObject.cxx.

References itk::DataObject::ConnectSource().

Referenced by itk::AutomaticTopologyMeshSource< TOutputMesh >::AutomaticTopologyMeshSource(), itk::BalloonForceFilter< TInputMesh, TOutputMesh >::BalloonForceFilter(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::BoundaryResolver(), itk::CoreAtomImageToDistanceMatrixProcess< TSourceImage >::CoreAtomImageToDistanceMatrixProcess(), itk::CoreAtomImageToUnaryCorrespondenceMatrixProcess< TSourceImage >::CoreAtomImageToUnaryCorrespondenceMatrixProcess(), itk::SimplexMeshToTriangleMeshFilter< TInputMesh, TOutputMesh >::CreateTriangles(), itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::DeformableMesh3DFilter(), itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >::DeformableSimplexMesh3DFilter(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::EquivalenceRelabeler(), itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >::ExtensionVelocitiesImageFilter(), itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >::FastMarchingExtensionImageFilter(), otb::FillGapsFilter::FillGapsFilter(), itk::ImageRegistrationMethod< TFixedImage, TMovingImage >::ImageRegistrationMethod(), itk::ImageSource< TOutputImage >::ImageSource(), itk::Statistics::ImageToListGenerator< TImage, TMaskImage >::ImageToListGenerator(), itk::ImageToMeshFilter< TInputImage, TOutputMesh >::ImageToMeshFilter(), itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >::ImageToSpatialObjectRegistrationMethod(), itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InsertNewCells(), otb::Statistics::ListSampleToBalancedListSampleFilter< TInputSampleList, TLabelSampleList, TOutputSampleList >::ListSampleToBalancedListSampleFilter(), otb::MeanShiftSmoothingImageFilter< TInputImage, TOutputImage, TKernel, TOutputIterationImage >::MeanShiftSmoothingImageFilter(), itk::MedialNodePairCorrespondenceProcess< TSourceImage >::MedialNodePairCorrespondenceProcess(), itk::MedialNodeTripletCorrespondenceProcess< TSourceImage >::MedialNodeTripletCorrespondenceProcess(), itk::MeshSource< TOutputMesh >::MeshSource(), itk::MinimumMaximumImageFilter< TInputImage >::MinimumMaximumImageFilter(), otb::MinMaxAttributesLabelMapFilter< TInputImage >::MinMaxAttributesLabelMapFilter(), itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >::MultiResolutionImageRegistrationMethod(), itk::MultiScaleHessianBasedMeasureImageFilter< TInputImage, THessianImage, TOutputImage >::MultiScaleHessianBasedMeasureImageFilter(), itk::PathSource< TOutputPath >::PathSource(), otb::PersistentCompareImageFilter< TInputImage >::PersistentCompareImageFilter(), otb::PersistentDescriptorsListSampleGenerator< TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample >::PersistentDescriptorsListSampleGenerator(), otb::PersistentHistogramVectorImageFilter< TInputImage >::PersistentHistogramVectorImageFilter(), otb::PersistentInnerProductVectorImageFilter< TInputImage >::PersistentInnerProductVectorImageFilter(), otb::PersistentMatrixTransposeMatrixImageFilter< TInputImage, TInputImage2 >::PersistentMatrixTransposeMatrixImageFilter(), otb::PersistentMinMaxImageFilter< TInputImage >::PersistentMinMaxImageFilter(), otb::PersistentMinMaxVectorImageFilter< TInputImage >::PersistentMinMaxVectorImageFilter(), otb::PersistentObjectDetectionClassifier< TInputImage, TOutputVectorData, TLabel, TFunctionType >::PersistentObjectDetectionClassifier(), otb::PersistentStatisticsImageFilter< TInputImage >::PersistentStatisticsImageFilter(), otb::PersistentStreamingStatisticsMapFromLabelImageFilter< TInputVectorImage, TLabelImage >::PersistentStreamingStatisticsMapFromLabelImageFilter(), otb::PersistentStreamingStatisticsVectorImageFilter< TInputImage, TPrecision >::PersistentStreamingStatisticsVectorImageFilter(), otb::PersistentVectorImageToMatrixFilter< TInputImage >::PersistentVectorImageToMatrixFilter(), itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >::PointSetToImageRegistrationMethod(), itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >::PointSetToPointSetRegistrationMethod(), otb::ProspectModel::ProspectModel(), itk::RegularSphereMeshSource< TOutputMesh >::RegularSphereMeshSource(), itk::watershed::Relabeler< TScalarType, TImageDimension >::Relabeler(), otb::SailModel::SailModel(), itk::watershed::Segmenter< TInputImage >::Segmenter(), itk::watershed::SegmentTreeGenerator< TScalarType >::SegmentTreeGenerator(), itk::watershed::Segmenter< InputImageType >::SetBoundary(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetEquivalencyTable(), itk::MeshSource< TOutputMesh >::SetOutput(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetOutputImage(), itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>::SetOutputImage(), itk::watershed::Segmenter< InputImageType >::SetOutputImage(), itk::watershed::Segmenter< InputImageType >::SetSegmentTable(), itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexMeshAdaptTopologyFilter(), itk::SphereMeshSource< TOutputMesh >::SphereMeshSource(), itk::StatisticsImageFilter< TInputImage >::StatisticsImageFilter(), itk::TriangleMeshToSimplexMeshFilter< TInputMesh, TOutputMesh >::TriangleMeshToSimplexMeshFilter(), itk::TwoOutputExampleImageFilter< TImage >::TwoOutputExampleImageFilter(), itk::VTKPolyDataReader< TOutputMesh >::VTKPolyDataReader(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD, TCost >::WaveletPacketTransform(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE, FullyDecomposedWaveletPacketCost< TInputImage > >::WaveletPacketTransform(), otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD >::WaveletTransform(), and otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE >::WaveletTransform().

void itk::ProcessObject::SetNumberOfInputs ( unsigned int num )

protectedinherited

Called to allocate the input array. Copies old inputs.

Called by constructor to set up input array.

Definition at line 96 of file itkProcessObject.cxx.

Referenced by otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD, TCost >::WaveletPacketTransform(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE, FullyDecomposedWaveletPacketCost< TInputImage > >::WaveletPacketTransform(), otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD >::WaveletTransform(), and otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE >::WaveletTransform().

void itk::ProcessObject::SetNumberOfOutputs ( unsigned int num )

protectedinherited

Called to allocate the output array. Copies old outputs.

Called by constructor to set up output array.

Definition at line 424 of file itkProcessObject.cxx.

Referenced by otb::MeanShiftSmoothingImageFilter< TInputImage, TOutputImage, TKernel, TOutputIterationImage >::MeanShiftSmoothingImageFilter(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD, TCost >::WaveletPacketTransform(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE, FullyDecomposedWaveletPacketCost< TInputImage > >::WaveletPacketTransform(), otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD >::WaveletTransform(), and otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE >::WaveletTransform().

virtual void itk::ProcessObject::SetNumberOfRequiredInputs ( unsigned int _arg )

protectedvirtualinherited

Referenced by itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >::DeformableSimplexMesh3DFilter(), itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >::ExtensionVelocitiesImageFilter(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::FastMarchingImageFilter(), otb::FillGapsFilter::FillGapsFilter(), otb::ImageToLabelMapWithAttributesFilter< TInputImage, TLabeledImage, TLabel, TLabelObject >::ImageToLabelMapWithAttributesFilter(), itk::ImageToMeshFilter< TInputImage, TOutputMesh >::ImageToMeshFilter(), itk::PasteImageFilter< TInputImage, TSourceImage, TOutputImage >::PasteImageFilter(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD, TCost >::WaveletPacketTransform(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE, FullyDecomposedWaveletPacketCost< TInputImage > >::WaveletPacketTransform(), otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD >::WaveletTransform(), and otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE >::WaveletTransform().

virtual void itk::ProcessObject::SetNumberOfRequiredOutputs ( unsigned int _arg )

protectedvirtualinherited

Referenced by itk::AutomaticTopologyMeshSource< TOutputMesh >::AutomaticTopologyMeshSource(), itk::BalloonForceFilter< TInputMesh, TOutputMesh >::BalloonForceFilter(), itk::CoreAtomImageToDistanceMatrixProcess< TSourceImage >::CoreAtomImageToDistanceMatrixProcess(), itk::CoreAtomImageToUnaryCorrespondenceMatrixProcess< TSourceImage >::CoreAtomImageToUnaryCorrespondenceMatrixProcess(), itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::DeformableMesh3DFilter(), itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >::DeformableSimplexMesh3DFilter(), itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >::ExtensionVelocitiesImageFilter(), itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >::FastMarchingExtensionImageFilter(), otb::FillGapsFilter::FillGapsFilter(), otb::GeometriesSource::GeometriesSource(), itk::ImageSource< TOutputImage >::ImageSource(), itk::ImageToMeshFilter< TInputImage, TOutputMesh >::ImageToMeshFilter(), itk::MedialNodePairCorrespondenceProcess< TSourceImage >::MedialNodePairCorrespondenceProcess(), itk::MedialNodeTripletCorrespondenceProcess< TSourceImage >::MedialNodeTripletCorrespondenceProcess(), itk::MeshSource< TOutputMesh >::MeshSource(), itk::MultiScaleHessianBasedMeasureImageFilter< TInputImage, THessianImage, TOutputImage >::MultiScaleHessianBasedMeasureImageFilter(), otb::OSMDataToVectorDataGenerator::OSMDataToVectorDataGenerator(), itk::PathSource< TOutputPath >::PathSource(), itk::RegularSphereMeshSource< TOutputMesh >::RegularSphereMeshSource(), itk::watershed::Relabeler< TScalarType, TImageDimension >::Relabeler(), itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexMeshAdaptTopologyFilter(), itk::SphereMeshSource< TOutputMesh >::SphereMeshSource(), itk::TriangleMeshToSimplexMeshFilter< TInputMesh, TOutputMesh >::TriangleMeshToSimplexMeshFilter(), itk::TwoOutputExampleImageFilter< TImage >::TwoOutputExampleImageFilter(), and itk::VTKPolyDataReader< TOutputMesh >::VTKPolyDataReader().

virtual void itk::ProcessObject::SetNumberOfThreads ( int _arg )

virtualinherited

Get/Set the number of threads to create when executing.

Referenced by itk::CannyEdgeDetectionImageFilter< TInputImage, TOutputImage >::Compute2ndDerivative(), itk::CannyEdgeDetectionImageFilter< TInputImage, TOutputImage >::Compute2ndDerivativePos(), and itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::PrecalculateChange().

virtual void itk::ProcessObject::SetProgress ( float _arg )

virtualinherited

Set the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution. The ProgressEvent is NOT invoked.

void itk::Object::SetReferenceCount ( int ref )

virtualinherited

Sets the reference count (use with care)

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 347 of file itkObject.cxx.

virtual void itk::ProcessObject::SetReleaseDataBeforeUpdateFlag ( bool _arg )

virtualinherited

Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.

void itk::ProcessObject::SetReleaseDataFlag ( bool flag )

virtualinherited

Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.

Definition at line 528 of file itkProcessObject.cxx.

template<class TLabelMap >

virtual void otb::HooverInstanceFilter< TLabelMap >::SetThreshold ( double _arg )

virtual

template<class TLabelMap >

virtual void otb::HooverInstanceFilter< TLabelMap >::SetUseExtendedAttributes ( bool _arg )

virtual

virtual int itk::ImageSource< TLabelMap >::SplitRequestedRegion	(	int	i,
		int	num,
		OutputImageRegionType &	splitRegion
	)

protectedvirtualinherited

Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". This method is called "num" times. The regions must not overlap. The method returns the number of pieces that the routine is capable of splitting the output RequestedRegion, i.e. return value is less than or equal to "num".

virtual void itk::LabelMapFilter< TLabelMap , TLabelMap >::ThreadedGenerateData	(	const OutputImageRegionType &	outputRegionForThread,
		int	threadId
	)

protectedvirtualinherited

If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). This superclass will automatically split the output image into a number of pieces, spawn multiple threads, and call ThreadedGenerateData() in each thread. Prior to spawning threads, the BeforeThreadedGenerateData() method is called. After all the threads have completed, the AfterThreadedGenerateData() method is called. If an image processing filter cannot support threading, that filter should provide an implementation of the GenerateData() method instead of providing an implementation of ThreadedGenerateData(). If a filter provides a GenerateData() method as its implementation, then the filter is responsible for allocating the output data. If a filter provides a ThreadedGenerateData() method as its implementation, then the output memory will allocated automatically by this superclass. The ThreadedGenerateData() method should only produce the output specified by "outputThreadRegion" parameter. ThreadedGenerateData() cannot write to any other portion of the output image (as this is responsibility of a different thread).

See also:: GenerateData(), SplitRequestedRegion()

Reimplemented from itk::ImageSource< TLabelMap >.

virtual void itk::LabelMapFilter< TLabelMap , TLabelMap >::ThreadedProcessLabelObject ( LabelObjectType * labelObject )

protectedvirtualinherited

template<class TLabelMap >

void otb::HooverInstanceFilter< TLabelMap >::ThreadedProcessLabelObject ( LabelObjectType * labelObject )

protectedvirtual

Actions :

Fill cardinalities of GT regions

Definition at line 236 of file otbHooverInstanceFilter.txx.

References otbWarningMacro.

static ITK_THREAD_RETURN_TYPE itk::ImageSource< TLabelMap >::ThreaderCallback ( void * arg )

staticprotectedinherited

Static function used as a "callback" by the MultiThreader. The threading library will call this routine for each thread, which will delegate the control to ThreadedGenerateData().

void itk::Object::UnRegister ( ) const

virtualinherited

Decrease the reference count (release by another object).

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 324 of file itkObject.cxx.

Referenced by itk::Object::New(), and itk::ObjectFactoryBase::UnRegisterFactory().

void itk::ProcessObject::Update ( void )

virtualinherited

Bring this filter up-to-date. Update() checks modified times against last execution times, and re-executes objects if necessary. A side effect of this method is that the whole pipeline may execute in order to bring this filter up-to-date. This method updates the currently prescribed requested region. If no requested region has been set on the output, then the requested region will be set to the largest possible region. Once the requested region is set, Update() will make sure the specified requested region is up-to-date. This is a confusing side effect to users who are just calling Update() on a filter. A first call to Update() will cause the largest possible region to be updated. A second call to Update() will update that same region. If a modification to the upstream pipeline cause a filter to have a different largest possible region, this second call to Update() will not cause the output requested region to be reset to the new largest possible region. Instead, the output requested region will be the same as the last time Update() was called. To have a filter always to produce its largest possible region, users should call UpdateLargestPossibleRegion() instead.

The following methods are used to coordinate the execution of the data processing pipeline.

Definition at line 611 of file itkProcessObject.cxx.

Referenced by otb::ImageSeriesFileReader< Image< TPixel, 2 >, Image< TInternalPixel, 2 > >::GenerateData(), otb::ImageSeriesFileReader< Image< TPixel, 2 >, VectorImage< TInternalPixel, 2 > >::GenerateData(), otb::ImageSeriesFileReader< VectorImage< TPixel, 2 >, VectorImage< TInternalPixel, 2 > >::GenerateData(), itk::AutoCropLabelMapFilter< TInputImage >::GenerateOutputInformation(), itk::LabelMapMaskImageFilter< TInputImage, TOutputImage >::GenerateOutputInformation(), and itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::RunSegmentOneStep().

void itk::ProcessObject::UpdateLargestPossibleRegion ( )

virtualinherited

Like Update(), but sets the output requested region to the largest possible region for the output. This is the method users should call if they want the entire dataset to be processed. If a user wants to update the same output region as a previous call to Update() or a previous call to UpdateLargestPossibleRegion(), then they should call the method Update().

Definition at line 1120 of file itkProcessObject.cxx.

void itk::ProcessObject::UpdateOutputData ( DataObject * output )

virtualinherited

Actually generate new output

 prevent chasing our tail

 Prepare all the outputs. This may deallocate previous bulk data.

 Propagate the update call - make sure everything we
 might rely on is up-to-date
 Must call PropagateRequestedRegion before UpdateOutputData if multiple 
 inputs since they may lead back to the same data object.

 Cache the state of any ReleaseDataFlag's on the inputs. While the
 filter is executing, we need to set the ReleaseDataFlag's on the
 inputs to false in case the current filter is implemented using a
 mini-pipeline (which will try to release the inputs).  After the
 filter finishes, we restore the state of the ReleaseDataFlag's
 before the call to ReleaseInputs().

 Tell all Observers that the filter is starting

 GenerateData this object - we have not aborted yet, and our progress
 before we start to execute is 0.0.

 Count the number of required inputs which have been assigned

 If we ended due to aborting, push the progress up to 1.0 (since
 it probably didn't end there)

 Notify end event observers

 Now we have to mark the data as up to date.

 Restore the state of any input ReleaseDataFlags

 Release any inputs if marked for release

Reimplemented in itk::StreamingImageFilter< TInputImage, TOutputImage >.

Definition at line 908 of file itkProcessObject.cxx.

void itk::ProcessObject::UpdateOutputInformation ( void )

virtualinherited

Update the information decribing the output data. This method transverses up the pipeline gathering modified time information. On the way back down the pipeline, this method calls GenerateOutputInformation() to set any necessary information about the output data objects. For instance, a filter that shrinks an image will need to provide an implementation for GenerateOutputInformation() that changes the spacing of the pixels. Such filters should call their superclass' implementation of GenerateOutputInformation prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.

 Watch out for loops in the pipeline

   Since we are in a loop, we will want to update. But if
   we don't modify this filter, then we will not execute
   because our OutputInformationMTime will be more recent than
   the MTime of our output.

 We now wish to set the PipelineMTime of each output DataObject to
 the largest of this ProcessObject's MTime, all input DataObject's
 PipelineMTime, and all input's MTime.  We begin with the MTime of
 this ProcessObject.

 Loop through the inputs

     Propagate the UpdateOutputInformation call

     What is the PipelineMTime of this input? Compare this against
     our current computation to find the largest one.

     Pipeline MTime of the input does not include the MTime of the 
     data object itself. Factor these mtimes into the next PipelineMTime

 Call GenerateOutputInformation for subclass specific information.
 Since UpdateOutputInformation propagates all the way up the pipeline,
 we need to be careful here to call GenerateOutputInformation only if
 necessary. Otherwise, we may cause this source to be modified which
 will cause it to execute again on the next update.

   Keep track of the last time GenerateOutputInformation() was called

Reimplemented in itk::watershed::Segmenter< TInputImage >, itk::watershed::Segmenter< InputImageType >, and itk::VTKImageImport< TOutputImage >.

Definition at line 664 of file itkProcessObject.cxx.

References itk::Object::GetMTime(), itk::DataObject::GetPipelineMTime(), itk::DataObject::SetPipelineMTime(), and itk::DataObject::UpdateOutputInformation().

Referenced by itk::VTKImageExportBase::UpdateInformationCallback().

void itk::ProcessObject::UpdateProgress ( float amount )

inherited

Update the progress of the process object.

Sets the Progress ivar to amount and invokes any observers for the ProgressEvent. The parameter amount should be in [0,1] and is the cumulative (not incremental) progress.

Update the progress of the process object. If a ProgressMethod exists, execute it. Then set the Progress ivar to amount. The parameter amount should range between (0,1).

Definition at line 500 of file itkProcessObject.cxx.

Referenced by itk::WatershedMiniPipelineProgressCommand::Execute(), itk::ProgressReporter::ProgressReporter(), and itk::ProgressReporter::~ProgressReporter().

Member Data Documentation

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_CD = 100

static

Definition at line 130 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_M = 103

static

Definition at line 133 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_N = 104

static

Definition at line 134 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_OS = 101

static

Definition at line 131 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_RA = 107

static

Definition at line 137 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_RC = 105

static

Definition at line 135 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_RF = 106

static

Definition at line 136 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_RM = 108

static

Definition at line 138 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_RN = 109

static

Definition at line 139 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

const AttributeType otb::HooverInstanceFilter< TLabelMap >::ATTRIBUTE_US = 102

static

Definition at line 132 of file otbHooverInstanceFilter.h.

const unsigned int itk::InPlaceLabelMapFilter< TLabelMap >::InputImageDimension

staticinherited

ImageDimension constants

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 104 of file itkInPlaceLabelMapFilter.h.

template<class TLabelMap >

CardinalVector otb::HooverInstanceFilter< TLabelMap >::m_CardRegGT

private

List of region sizes in GT

Definition at line 246 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

CardinalVector otb::HooverInstanceFilter< TLabelMap >::m_CardRegMS

private

List of region sizes in MS

Definition at line 249 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

MatrixType otb::HooverInstanceFilter< TLabelMap >::m_HooverMatrix

private

Hoover confusion matrix computed between GT and MS

Definition at line 243 of file otbHooverInstanceFilter.h.

FastMutexLock::Pointer itk::LabelMapFilter< TLabelMap , TLabelMap >::m_LabelObjectContainerLock

protectedinherited

Definition at line 114 of file itkLabelMapFilter.h.

template<class TLabelMap >

LabelVectorType otb::HooverInstanceFilter< TLabelMap >::m_LabelsGT

private

List of labels in GT segmentation

Definition at line 240 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

AttributesValueType otb::HooverInstanceFilter< TLabelMap >::m_MeanRA

private

Average score for under segmentation on the whole segmentation

Definition at line 264 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

AttributesValueType otb::HooverInstanceFilter< TLabelMap >::m_MeanRC

private

Average score for correct detection on the whole segmentation

Definition at line 258 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

AttributesValueType otb::HooverInstanceFilter< TLabelMap >::m_MeanRF

private

Average score for over segmentation on the whole segmentation

Definition at line 261 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

AttributesValueType otb::HooverInstanceFilter< TLabelMap >::m_MeanRM

private

Average score for missed detection on the whole segmentation

Definition at line 267 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

AttributesValueType otb::HooverInstanceFilter< TLabelMap >::m_MeanRN

private

Average score for noise on the whole segmentation

Definition at line 270 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

unsigned long otb::HooverInstanceFilter< TLabelMap >::m_NumberOfRegionsGT

private

number of regions (label objects) found in ground truth (GT)

Definition at line 234 of file otbHooverInstanceFilter.h.

template<class TLabelMap >

unsigned long otb::HooverInstanceFilter< TLabelMap >::m_NumberOfRegionsMS

private

number of regions (label objects) found in machine segmentation (MS)

Definition at line 237 of file otbHooverInstanceFilter.h.

TimeStamp itk::ProcessObject::m_OutputInformationMTime

protectedinherited

Time when GenerateOutputInformation was last called.

Definition at line 421 of file itkProcessObject.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount

mutableprotectedinherited

Number of uses of this object by other objects.

Definition at line 141 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock

mutableprotectedinherited

Mutex lock to protect modification to the reference count

Definition at line 144 of file itkLightObject.h.

template<class TLabelMap >

double otb::HooverInstanceFilter< TLabelMap >::m_Threshold

private

Threshold used to compute Hoover instances

Definition at line 252 of file otbHooverInstanceFilter.h.

bool itk::ProcessObject::m_Updating

protectedinherited

These ivars are made protected so filters like itkStreamingImageFilter can access them directly. This flag indicates when the pipeline is executing. It prevents infinite recursion when pipelines have loops.

Reimplemented in otb::ImageViewerBase< TPixel, TLabel >, and otb::HistogramAndTransferFunctionWidget< THistogram, TPixel >.

Definition at line 418 of file itkProcessObject.h.

template<class TLabelMap >

bool otb::HooverInstanceFilter< TLabelMap >::m_UseExtendedAttributes

private

Flag to output additional information in label maps

Definition at line 255 of file otbHooverInstanceFilter.h.

const unsigned int itk::InPlaceLabelMapFilter< TLabelMap >::OutputImageDimension

staticinherited

ImageDimension constant

Reimplemented from itk::LabelMapFilter< TLabelMap, TLabelMap >.

Definition at line 105 of file itkInPlaceLabelMapFilter.h.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Static Public Attributes

Protected Types

Protected Member Functions

Static Protected Member Functions

Protected Attributes

Private Attributes

Detailed Description

template<class TLabelMap> class otb::HooverInstanceFilter< TLabelMap >

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<class TLabelMap>
class otb::HooverInstanceFilter< TLabelMap >