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Orfeo Toolbox
3.16
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Base class for ActiveShapeModelCalculator object. More...
#include <itkActiveShapeModelCalculator.h>
Inheritance diagram for itk::ActiveShapeModelCalculator< TImage >:
Collaboration diagram for itk::ActiveShapeModelCalculator< TImage >:Public Member Functions | |
| unsigned long | AddObserver (const EventObject &event, Command *) |
| unsigned long | AddObserver (const EventObject &event, Command *) const |
| virtual ::itk::LightObject::Pointer | CreateAnother (void) const |
| virtual void | DebugOff () const |
| virtual void | DebugOn () const |
| virtual void | Delete () |
| void | GenerateData () |
| Command * | GetCommand (unsigned long tag) |
| bool | GetDebug () const |
| VectorOfDoubleType | GetEigenvalues () |
| MatrixOfDoubleType | GetEigenvector () |
| const double & | GetLowerThresholdGradient () const |
| VectorOfDoubleType | GetMeanShape () |
| MetaDataDictionary & | GetMetaDataDictionary (void) |
| const MetaDataDictionary & | GetMetaDataDictionary (void) const |
| virtual unsigned long | GetMTime () const |
| virtual const char * | GetNameOfClass () const |
| const unsigned int & | GetNumberOfTrainingImages () const |
| const unsigned int & | GetPruneIteration () const |
| virtual int | GetReferenceCount () const |
| const double & | GetTolerance () const |
| const double & | GetUpperThresholdDistance () const |
| const double & | GetUpperThresholdMeanDistance () const |
| bool | HasObserver (const EventObject &event) const |
| void | InvokeEvent (const EventObject &) |
| void | InvokeEvent (const EventObject &) const |
| virtual void | Modified () const |
| void | Print (std::ostream &os, Indent indent=0) const |
| virtual void | Register () const |
| void | RemoveAllObservers () |
| void | RemoveObserver (unsigned long tag) |
| void | SetDebug (bool debugFlag) const |
| virtual void | SetImage (const Image3DType *image) |
| void | SetLowerThresholdGradient (const double <) |
| void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
| void | SetPruneIteration (const unsigned int &t) |
| virtual void | SetReferenceCount (int) |
| void | SetTolerance (const double &t) |
| void | SetUpperThresholdDistance (const double &ut2) |
| void | SetUpperThresholdMeanDistance (const double &ut1) |
| virtual void | UnRegister () const |
Static Public Member Functions | |
| static void | BreakOnError () |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static Pointer | New () |
| static void | SetGlobalWarningDisplay (bool flag) |
Protected Types | |
| typedef int | InternalReferenceCountType |
Protected Member Functions | |
| ActiveShapeModelCalculator () | |
| ~ActiveShapeModelCalculator () | |
| virtual void | PrintHeader (std::ostream &os, Indent indent) const |
| bool | PrintObservers (std::ostream &os, Indent indent) const |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
Protected Attributes | |
| InternalReferenceCountType | m_ReferenceCount |
| SimpleFastMutexLock | m_ReferenceCountLock |
Private Member Functions | |
| ActiveShapeModelCalculator (const Self &) | |
| void | operator= (const Self &) |
Private Attributes | |
| VectorOfDoubleType | m_EigenValues |
| MatrixOfDoubleType | m_EigenVectors |
| Image3DConstPointer | m_Image |
| float | m_LowerThreshold |
| VectorOfDoubleType | m_Means |
| unsigned int | m_NumberOfTrainingImages |
| unsigned int | m_PruneIteration |
| float | m_Tolerance |
| float | m_UpperThreshold1 |
| float | m_UpperThreshold2 |
| bool | m_Valid |
Base class for ActiveShapeModelCalculator object.
itkActiveShapeModelCalculator performs a principal component analysis (PCA) on a set of binary tranining images. The input is a binary volume that contains the shapes. The number of largest principal components which explain 98% of shape variance is automatically computed. The ITK pipeline mechanism sets up the storage for input images. The outputs are the mean shape, eigenvectors and eigenvalues. The user specifies the tolerance value (in pixel unit) for automatic landmark identification. The algorithm uses the VNL library to perform the eigen analysis.
The Update() function enables the calculation of the various models, creates the membership function objects and populates them.
[2] D. H. Douglas and T. K. Peucker, Algorithms for the reduction of the number of points required to represent a digitized line or its caricature, Canadian Cartographer 10(2), pp. 112–122, 1973.
Definition at line 77 of file itkActiveShapeModelCalculator.h.
| typedef BinaryThresholdImageFilter<Image3DType, Image3DType > itk::ActiveShapeModelCalculator< TImage >::BinaryFilterType |
Definition at line 149 of file itkActiveShapeModelCalculator.h.
| typedef BinaryThresholdImageFilter<Image2DType, Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::BinaryFilterType1 |
Definition at line 150 of file itkActiveShapeModelCalculator.h.
| typedef BinaryThresholdImageFilter<Image3DType, Image3D8bitsType > itk::ActiveShapeModelCalculator< TImage >::BinaryFilterType2 |
Definition at line 151 of file itkActiveShapeModelCalculator.h.
| typedef ImageRegionConstIterator< Image3D8bitsType > itk::ActiveShapeModelCalculator< TImage >::ConstIteratorType |
Definition at line 142 of file itkActiveShapeModelCalculator.h.
| typedef SmartPointer<const Self> itk::ActiveShapeModelCalculator< TImage >::ConstPointer |
Reimplemented from itk::Object.
Definition at line 84 of file itkActiveShapeModelCalculator.h.
| typedef DanielssonDistanceMapImageFilter< Image3DType, Image3DType > itk::ActiveShapeModelCalculator< TImage >::DistanceMapFilterType |
Definition at line 152 of file itkActiveShapeModelCalculator.h.
| typedef GradientMagnitudeImageFilter< Image3DType, Image3DType > itk::ActiveShapeModelCalculator< TImage >::GradientFilterType |
Standard filter type within this class.
Definition at line 148 of file itkActiveShapeModelCalculator.h.
| typedef Image< Pixel8bitsType, 2 > itk::ActiveShapeModelCalculator< TImage >::Image2D8bitsType |
Definition at line 116 of file itkActiveShapeModelCalculator.h.
| typedef Image2DType::Pointer itk::ActiveShapeModelCalculator< TImage >::Image2DPointer |
Standard image type pointer within this class.
Definition at line 124 of file itkActiveShapeModelCalculator.h.
| typedef Image< PixelType, 2 > itk::ActiveShapeModelCalculator< TImage >::Image2DType |
Definition at line 115 of file itkActiveShapeModelCalculator.h.
| typedef Image< Pixel8bitsType, 3 > itk::ActiveShapeModelCalculator< TImage >::Image3D8bitsType |
Definition at line 117 of file itkActiveShapeModelCalculator.h.
| typedef Image3DType::ConstPointer itk::ActiveShapeModelCalculator< TImage >::Image3DConstPointer |
Definition at line 125 of file itkActiveShapeModelCalculator.h.
| typedef TImage itk::ActiveShapeModelCalculator< TImage >::Image3DType |
Standard image type within this class.
Definition at line 114 of file itkActiveShapeModelCalculator.h.
| typedef Image3DType::IndexType itk::ActiveShapeModelCalculator< TImage >::Index3DType |
Definition at line 121 of file itkActiveShapeModelCalculator.h.
| typedef Image2D8bitsType::IndexType itk::ActiveShapeModelCalculator< TImage >::IndexType |
Standard index type within this class.
Definition at line 120 of file itkActiveShapeModelCalculator.h.
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protectedinherited |
Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 137 of file itkLightObject.h.
| typedef ImageRegionIterator< Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::IteratorType |
Definition at line 143 of file itkActiveShapeModelCalculator.h.
| typedef ImageLinearIteratorWithIndex< Image2DType > itk::ActiveShapeModelCalculator< TImage >::LinearIteratorType |
Standard iterator type within this class.
Definition at line 140 of file itkActiveShapeModelCalculator.h.
| typedef std::list<IndexType> itk::ActiveShapeModelCalculator< TImage >::List2DType |
Standard list type within this class.
Definition at line 136 of file itkActiveShapeModelCalculator.h.
| typedef vnl_matrix<double> itk::ActiveShapeModelCalculator< TImage >::MatrixOfDoubleType |
Standard matrix type within this class.
Definition at line 110 of file itkActiveShapeModelCalculator.h.
| typedef vnl_matrix<int> itk::ActiveShapeModelCalculator< TImage >::MatrixOfIntegerType |
Definition at line 111 of file itkActiveShapeModelCalculator.h.
| typedef Vector< unsigned int, 2 > itk::ActiveShapeModelCalculator< TImage >::MeasurementVectorType |
Definition at line 103 of file itkActiveShapeModelCalculator.h.
| typedef NeighborhoodIterator< Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::NeighborIteratorType |
Definition at line 144 of file itkActiveShapeModelCalculator.h.
| typedef unsigned char itk::ActiveShapeModelCalculator< TImage >::Pixel8bitsType |
Definition at line 98 of file itkActiveShapeModelCalculator.h.
| typedef float itk::ActiveShapeModelCalculator< TImage >::PixelType |
Extract the dimension of the image.
itkStaticConstMacro(ImageDimension, unsigned int, TImage::ImageDimension); Standard pixel type within this class.
Definition at line 90 of file itkActiveShapeModelCalculator.h.
| typedef PointSetType::PointDataContainer itk::ActiveShapeModelCalculator< TImage >::PointDataContainer |
Definition at line 133 of file itkActiveShapeModelCalculator.h.
| typedef SmartPointer<Self> itk::ActiveShapeModelCalculator< TImage >::Pointer |
Reimplemented from itk::Object.
Definition at line 83 of file itkActiveShapeModelCalculator.h.
| typedef PointSetType::PointsContainer itk::ActiveShapeModelCalculator< TImage >::PointsContainer |
Standard container type within this class.
Definition at line 132 of file itkActiveShapeModelCalculator.h.
| typedef PointSet< unsigned short, 2 > itk::ActiveShapeModelCalculator< TImage >::PointSetType |
Standard PointSet type within this class.
Definition at line 128 of file itkActiveShapeModelCalculator.h.
| typedef PointsContainer::Iterator itk::ActiveShapeModelCalculator< TImage >::PointsIterator |
Definition at line 145 of file itkActiveShapeModelCalculator.h.
| typedef PointSetType::PointType itk::ActiveShapeModelCalculator< TImage >::PointType |
Definition at line 129 of file itkActiveShapeModelCalculator.h.
| typedef BinaryPruningImageFilter< Image2D8bitsType, Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::PruneFilterType |
Definition at line 154 of file itkActiveShapeModelCalculator.h.
| typedef Statistics::ListSample< MeasurementVectorType > itk::ActiveShapeModelCalculator< TImage >::SampleType |
Definition at line 137 of file itkActiveShapeModelCalculator.h.
| typedef ActiveShapeModelCalculator<TImage> itk::ActiveShapeModelCalculator< TImage >::Self |
Standard class typedefs.
Reimplemented from itk::Object.
Definition at line 81 of file itkActiveShapeModelCalculator.h.
| typedef ImageSliceConstIteratorWithIndex< Image3DType > itk::ActiveShapeModelCalculator< TImage >::SliceIteratorType |
Definition at line 141 of file itkActiveShapeModelCalculator.h.
| typedef Object itk::ActiveShapeModelCalculator< TImage >::Superclass |
Reimplemented from itk::Object.
Definition at line 82 of file itkActiveShapeModelCalculator.h.
| typedef BinaryThinningImageFilter< Image2D8bitsType, Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::ThinFilterType |
Definition at line 153 of file itkActiveShapeModelCalculator.h.
| typedef Vector< double, 2 > itk::ActiveShapeModelCalculator< TImage >::Vector2DType |
Standard vector type within this class.
Definition at line 101 of file itkActiveShapeModelCalculator.h.
| typedef Vector< double, 3 > itk::ActiveShapeModelCalculator< TImage >::Vector3DType |
Definition at line 102 of file itkActiveShapeModelCalculator.h.
| typedef vnl_vector<double> itk::ActiveShapeModelCalculator< TImage >::VectorOfDoubleType |
Definition at line 105 of file itkActiveShapeModelCalculator.h.
| typedef std::vector< unsigned int> itk::ActiveShapeModelCalculator< TImage >::VectorType |
Definition at line 104 of file itkActiveShapeModelCalculator.h.
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inlineprotected |
Definition at line 225 of file itkActiveShapeModelCalculator.h.
References NULL.
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inlineprotected |
Definition at line 240 of file itkActiveShapeModelCalculator.h.
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private |
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inherited |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
Definition at line 389 of file itkObject.cxx.
References itk::SubjectImplementation::AddObserver().
Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), itk::ProgressAccumulator::RegisterInternalFilter(), otb::ImageFileWriter< TInputImage >::Update(), and otb::WriterWatcherBase::WriterWatcherBase().
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inherited |
Definition at line 401 of file itkObject.cxx.
References itk::SubjectImplementation::AddObserver().
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staticinherited |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
Definition at line 149 of file itkLightObject.cxx.
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virtual |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::Object.
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virtualinherited |
Turn debugging output off.
Definition at line 253 of file itkObject.cxx.
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virtualinherited |
Turn debugging output on.
Definition at line 242 of file itkObject.cxx.
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virtualinherited |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
Delete a itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C++ delete method will not work with reference counting.
Definition at line 88 of file itkLightObject.cxx.
| void itk::ActiveShapeModelCalculator< TImage >::GenerateData | ( | void | ) |
Compute mean, eigenvectors and eigenvalues of a new or modified training set. This method computes the mean, eigenvectors and eigenvalues of the training set given as a parameter and stores them in the object. The values of these parameters can then be retrieved by using other methods of this object.
Generate data (start the model building process)
Set the number of training images
Normal slope ****************
Definition at line 46 of file itkActiveShapeModelCalculator.txx.
References itk::Size< VDimension >::Fill(), itk::FixedArray< TValueType, VLength >::Fill(), itk::Index< VIndexDimension >::GetIndex(), itk::Vector< T, NVectorDimension >::GetSquaredNorm(), and itk::ImageLinearConstIteratorWithIndex< TImage >::SetDirection().
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inherited |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
Definition at line 414 of file itkObject.cxx.
References itk::Object::GetCommand(), and NULL.
Referenced by itk::Object::GetCommand().
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inherited |
Get the value of the debug flag.
Definition at line 264 of file itkObject.cxx.
Referenced by otb::ogr::ImageReference< double >::GetDebug().
| ActiveShapeModelCalculator< TImage >::VectorOfDoubleType itk::ActiveShapeModelCalculator< TImage >::GetEigenvalues | ( | ) |
Return the largest t eigenvalues [1 x t]
Get the largest t eigenvalues
Definition at line 706 of file itkActiveShapeModelCalculator.txx.
| ActiveShapeModelCalculator< TImage >::MatrixOfDoubleType itk::ActiveShapeModelCalculator< TImage >::GetEigenvector | ( | ) |
Return the matrix where each column corresponds to a eigenvector [2n x t]
Get the eigen vectors
Definition at line 721 of file itkActiveShapeModelCalculator.txx.
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staticinherited |
Get the value of the global debug output control flag.
Definition at line 381 of file itkObject.cxx.
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inline |
Definition at line 172 of file itkActiveShapeModelCalculator.h.
| ActiveShapeModelCalculator< TImage >::VectorOfDoubleType itk::ActiveShapeModelCalculator< TImage >::GetMeanShape | ( | ) |
Return the mean Shape of the model (x1 y1 x2 y2 ... xn yn), where n = n. of landmarks
Definition at line 691 of file itkActiveShapeModelCalculator.txx.
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inherited |
Reimplemented in otb::ImageMetadataInterfaceBase.
Definition at line 532 of file itkObject.cxx.
References NULL.
Referenced by otb::RenderingImageFilter< TInputImage, TOutputImage >::BeforeThreadedGenerateData(), itk::Brains2MaskImageIO::CanReadFile(), otb::DataNode< TPrecision, VDimension, TValuePrecision >::CopyFieldList(), otb::VectorImage< TPixel, VImageDimension >::CopyInformation(), otb::Image< TPixel, VImageDimension >::CopyInformation(), itk::GDCMImageIO::GetBodyPart(), itk::GDCMImageIO::GetInstitution(), itk::GDCMImageIO::GetManufacturer(), itk::GDCMImageIO::GetModality(), itk::GDCMImageIO::GetModel(), itk::GDCMImageIO::GetNumberOfSeriesInStudy(), itk::GDCMImageIO::GetNumberOfStudyRelatedSeries(), itk::GDCMImageIO::GetPatientAge(), itk::GDCMImageIO::GetPatientDOB(), itk::GDCMImageIO::GetPatientID(), itk::GDCMImageIO::GetPatientName(), itk::GDCMImageIO::GetPatientSex(), itk::GDCMImageIO::GetScanOptions(), itk::GDCMImageIO::GetStudyDate(), itk::GDCMImageIO::GetStudyDescription(), itk::GDCMImageIO::GetStudyID(), itk::GDCMImageIO::GetValueFromTag(), otb::GDALImageIO::InternalReadImageInformation(), itk::GDCMImageIO::InternalReadImageInformation(), otb::GDALImageIO::InternalWriteImageInformation(), otb::RAMDrivenAdaptativeStreamingManager< TImage >::PrepareStreaming(), itk::DICOMImageIO2::Read(), itk::DICOMImageIO2::ReadImageInformation(), itk::NrrdImageIO::ReadImageInformation(), otb::JPEG2000ImageIO::ReadImageInformation(), itk::MetaImageIO::ReadImageInformation(), itk::VoxBoCUBImageIO::ReadImageInformation(), itk::MRCImageIO::ReadImageInformation(), itk::IPLCommonImageIO::ReadImageInformation(), itk::PhilipsRECImageIO::ReadImageInformation(), itk::AnalyzeImageIO::ReadImageInformation(), itk::Bruker2DSEQImageIO::ReadImageInformation(), otb::ImageMetadataInterfaceBase::SetImage(), itk::NiftiImageIO::SetImageIOMetadataFromNIfTI(), otb::VectorDataToLabelImageFilter< TVectorData, TOutputImage >::SetOutputParametersFromImage(), itk::NrrdImageIO::Write(), itk::GDCMImageIO::Write(), and itk::PolygonGroupSpatialObjectXMLFileWriter::WriteFile().
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inherited |
Reimplemented in otb::ImageMetadataInterfaceBase.
Definition at line 543 of file itkObject.cxx.
References NULL.
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virtualinherited |
Return this objects modified time.
Return the modification for this object.
Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::SpatialObject< TDimension >, itk::SpatialObject< 3 >, itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::MeshSpatialObject< TMesh >, and itk::SceneSpatialObject< TSpaceDimension >.
Definition at line 286 of file itkObject.cxx.
Referenced by itk::DeformationFieldSource< TOutputImage >::GetMTime(), itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >::GetMTime(), itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::GetMTime(), itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< TDimension >::GetMTime(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime(), otb::Function::NoStretchRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), itk::VTKImageExportBase::PipelineModifiedCallback(), and itk::ProcessObject::UpdateOutputInformation().
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Run-time type information (and related methods).
Reimplemented from itk::Object.
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Get the number of training images.
Definition at line 204 of file itkActiveShapeModelCalculator.h.
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inline |
Definition at line 200 of file itkActiveShapeModelCalculator.h.
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Gets the reference count on this object.
Definition at line 105 of file itkLightObject.h.
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inline |
Definition at line 194 of file itkActiveShapeModelCalculator.h.
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Definition at line 188 of file itkActiveShapeModelCalculator.h.
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Definition at line 180 of file itkActiveShapeModelCalculator.h.
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inlinestaticinherited |
Definition at line 100 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
Referenced by itk::OutputWindow::DisplayText(), itk::Win32OutputWindow::PromptText(), and itk::Win32OutputWindow::WndProc().
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inlinestaticinherited |
Definition at line 98 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
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inherited |
Return true if an observer is registered for this event.
Definition at line 467 of file itkObject.cxx.
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inherited |
Call Execute on all the Commands observing this event id.
Definition at line 446 of file itkObject.cxx.
Referenced by otb::Wrapper::Application::AddProcess(), itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback(), and itk::VTKImageExportBase::UpdateDataCallback().
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inherited |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
Definition at line 457 of file itkObject.cxx.
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virtualinherited |
Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Make sure this object's modified time is greater than all others.
Reimplemented in otb::SVMModel< TValue, TLabel >, otb::SurfaceAdjacencyEffect6SCorrectionSchemeFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, otb::GenericRSTransform< TScalarType, NInputDimensions, NOutputDimensions >, otb::MeanShiftImageFilter< TInputImage, TOutputImage, TLabeledOutput, TBufferConverter >, otb::MeanShiftImageFilter< TInputImage, TOutputImage, TLabeledOutput, MeanShift::VectorBufferConverter >, otb::GCPsToRPCSensorModelImageFilter< TImage >, otb::Polygon< TValue >, otb::ImageRegionAdaptativeSplitter< VImageDimension >, otb::GenericInterpolateImageFunction< TInputImage, TFunction, TBoundaryCondition, TCoordRep >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, otb::PolyLineParametricPathWithValue< TValue, VDimension >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, otb::PolyLineParametricPathWithValue< TValue, 2 >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, otb::PhysicalToRPCSensorModelImageFilter< TImage >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >, itk::NormalizeImageFilter< TInputImage, TOutputImage >, and otb::StatisticsXMLFileReader< TMeasurementVector >.
Definition at line 297 of file itkObject.cxx.
Referenced by otb::Wrapper::InputImageListParameter::AddFromFileName(), otb::Wrapper::InputVectorDataListParameter::AddFromFileName(), otb::Wrapper::InputImageListParameter::AddImage(), otb::Wrapper::InputImageListParameter::AddNullElement(), otb::Wrapper::InputVectorDataListParameter::AddNullElement(), otb::Wrapper::StringListParameter::AddNullElement(), otb::VectorDataModel::AddPointToGeometry(), otb::Wrapper::InputVectorDataListParameter::AddVectorData(), otb::Wrapper::InputImageListParameter::ClearValue(), otb::Wrapper::InputVectorDataListParameter::ClearValue(), otb::VectorDataModel::DeleteGeometry(), otb::VectorDataModel::EndGeometry(), otb::Wrapper::InputImageListParameter::Erase(), otb::Wrapper::InputVectorDataListParameter::Erase(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), otb::ImageWidget< TInputImage >::LinearInterpolationOff(), otb::ImageWidget< TInputImage >::LinearInterpolationOn(), itk::MatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >::MatrixOffsetTransformBase(), otb::ogr::ImageReference< double >::Modified(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetAutoMinMax(), otb::BlendingImageFilter< TInputImage1, TInputImage2, TOutputImage >::SetBlendingFunction(), otb::ImageLayerGenerator< TImageLayer >::SetBlendingFunction(), otb::TileMapImageIO::SetCacheDirectory(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetChannelList(), itk::LBFGSBOptimizer::SetCostFunction(), itk::MINC2ImageIO::SetDimensionName(), itk::ImageIOBase::SetDimensions(), itk::ImageIOBase::SetDirection(), otb::Wrapper::InputImageListParameter::SetImageList(), itk::GDCMSeriesFileNames::SetInputDirectory(), otb::HistogramStatisticsFunction< TInputHistogram, TOutput >::SetInputHistogram(), otb::ImageToGenericRSOutputParameters< TImage >::SetInputKeywordList(), otb::Wrapper::InputVectorDataListParameter::SetListFromFileName(), otb::Wrapper::InputImageListParameter::SetListFromFileName(), otb::Function::RenderingFunction< TPixel, TRGBPixel >::SetListSample(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), otb::Wrapper::InputImageListParameter::SetNthFileName(), otb::Wrapper::InputVectorDataListParameter::SetNthFileName(), itk::ImageIOBase::SetNumberOfDimensions(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ImageIOBase::SetOrigin(), otb::ImageToGenericRSOutputParameters< TImage >::SetOutputProjectionRef(), otb::MapProjectionAdapter::SetParameter(), otb::Function::GaussianRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetParameters(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetParameters(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), otb::ImageLayerGenerator< TImageLayer >::SetRenderingFunction(), otb::RenderingImageFilter< TInputImage, TOutputImage >::SetRenderingFunction(), itk::ImageIOBase::SetSpacing(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation(), otb::Wrapper::OutputFilenameParameter::SetValue(), otb::Wrapper::InputFilenameParameter::SetValue(), otb::Wrapper::ListViewParameter::SetValue(), otb::Wrapper::ChoiceParameter::SetValue(), otb::Wrapper::InputVectorDataListParameter::SetVectorDataList(), and otb::MapProjectionAdapter::SetWkt().
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Method for creation through the object factory.
Reimplemented from itk::Object.
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Reimplemented from itk::Object.
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inherited |
Cause the object to print itself out.
Avoid DLL boundary problems. This function will be common to all itk objects. It just calls the header/self/trailer virtual print methods, which can be overriden by subclasses (any itk object).
Definition at line 135 of file itkLightObject.cxx.
References itk::Indent::GetNextIndent().
Referenced by itk::operator<<().
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Define a default print header for all objects.
Definition at line 320 of file itkLightObject.cxx.
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Definition at line 478 of file itkObject.cxx.
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Chaining method to print an object's instance variables, as well as its superclasses.
Reimplemented from itk::Object.
Definition at line 242 of file itkActiveShapeModelCalculator.h.
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Define a default print trailer for all objects.
Definition at line 331 of file itkLightObject.cxx.
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Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
Definition at line 309 of file itkObject.cxx.
Referenced by itk::ObjectFactoryBase::RegisterFactory().
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Remove all observers .
Definition at line 435 of file itkObject.cxx.
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Remove the observer with this tag value.
Definition at line 425 of file itkObject.cxx.
Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), and otb::ImageFileWriter< TInputImage >::Update().
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Set the value of the debug flag. A non-zero value turns debugging on.
Definition at line 275 of file itkObject.cxx.
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This is a global flag that controls whether any debug, warning or error messages are displayed.
Set the value of the global debug output control flag.
Definition at line 370 of file itkObject.cxx.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
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Set the input binary image (values in {0,255}) .
Definition at line 157 of file itkActiveShapeModelCalculator.h.
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Set/Get the lower threshold for the binary filter applied on the gradient images. Changing this value from the default is not recommended or necessary but could be used to get thinner contours at the risk of creating an unstable solution.
Definition at line 170 of file itkActiveShapeModelCalculator.h.
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Reimplemented in otb::ImageMetadataInterfaceBase.
Definition at line 554 of file itkObject.cxx.
References NULL.
Referenced by otb::VectorImage< TPixel, VImageDimension >::CopyInformation(), and otb::Image< TPixel, VImageDimension >::CopyInformation().
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Set/Get the number of iteration for Pruning filter
Definition at line 198 of file itkActiveShapeModelCalculator.h.
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Sets the reference count (use with care)
If there is a delete method, invoke it.
Reimplemented from itk::LightObject.
Definition at line 347 of file itkObject.cxx.
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Set/Get the tolerance threshold (in pixels unit) for the automatic landmarks.
Definition at line 192 of file itkActiveShapeModelCalculator.h.
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Set/Get the distance threshold for the binary filter applied on the distance images Changing this value from the default is not recommended or necessary but could be used to get thicker contours at the risk of creating an unstable solution.
Definition at line 186 of file itkActiveShapeModelCalculator.h.
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Set/Get the distance threshold for the binary filter applied on the mean of the distance images. Changing this value from the default is not recommended or necessary but could be used to get thicker contours at the risk of creating an unstable solution.
Definition at line 178 of file itkActiveShapeModelCalculator.h.
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virtualinherited |
Decrease the reference count (release by another object).
If there is a delete method, invoke it.
Reimplemented from itk::LightObject.
Definition at line 324 of file itkObject.cxx.
Referenced by itk::Object::New(), and itk::ObjectFactoryBase::UnRegisterFactory().
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Definition at line 293 of file itkActiveShapeModelCalculator.h.
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Definition at line 292 of file itkActiveShapeModelCalculator.h.
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Definition at line 296 of file itkActiveShapeModelCalculator.h.
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Definition at line 287 of file itkActiveShapeModelCalculator.h.
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Definition at line 291 of file itkActiveShapeModelCalculator.h.
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Definition at line 294 of file itkActiveShapeModelCalculator.h.
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Definition at line 295 of file itkActiveShapeModelCalculator.h.
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mutableprotectedinherited |
Number of uses of this object by other objects.
Definition at line 141 of file itkLightObject.h.
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mutableprotectedinherited |
Mutex lock to protect modification to the reference count
Definition at line 144 of file itkLightObject.h.
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Definition at line 290 of file itkActiveShapeModelCalculator.h.
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Definition at line 288 of file itkActiveShapeModelCalculator.h.
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Definition at line 289 of file itkActiveShapeModelCalculator.h.
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Definition at line 286 of file itkActiveShapeModelCalculator.h.