Give access to partial aspects of voxels from an Image. More...

#include <itkImageAdaptor.h>

Inheritance diagram for itk::ImageAdaptor< TImage, TAccessor >:

Collaboration diagram for itk::ImageAdaptor< TImage, TAccessor >:

Public Types
typedef DefaultPixelAccessorFunctor < Self >	AccessorFunctorType
typedef TAccessor	AccessorType
typedef SmartPointer< const Self >	ConstPointer
typedef WeakPointer< const Self >	ConstWeakPointer
typedef Superclass::DirectionType	DirectionType
typedef Superclass::IndexType	IndexType
typedef IndexType::IndexValueType	IndexValueType
typedef TImage	InternalImageType
typedef InternalPixelType *	InternalPixelPointerType
typedef TAccessor::InternalType	InternalPixelType
typedef PixelType	IOPixelType
typedef Superclass::OffsetType	OffsetType
typedef OffsetType::OffsetValueType	OffsetValueType
typedef TImage::PixelContainer	PixelContainer
typedef TImage::PixelContainerConstPointer	PixelContainerConstPointer
typedef TImage::PixelContainerPointer	PixelContainerPointer
typedef TAccessor::ExternalType	PixelType
typedef SmartPointer< Self >	Pointer
typedef Superclass::PointType	PointType
typedef double	PointValueType
typedef Superclass::RegionType	RegionType
typedef ImageAdaptor	Self
typedef Superclass::SizeType	SizeType
typedef SizeType::SizeValueType	SizeValueType
typedef Superclass::SpacingType	SpacingType
typedef double	SpacingValueType
typedef ImageBase < itkGetStaticConstMacro(ImageDimension)>	Superclass

Public Member Functions
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
void	Allocate ()
IndexType	ComputeIndex (OffsetValueType offset) const
OffsetValueType	ComputeOffset (const IndexType &ind) const
virtual void	CopyInformation (const DataObject *data)
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
void	DataHasBeenGenerated ()
virtual void	DebugOff () const
virtual void	DebugOn () const
virtual void	Delete ()
void	DisconnectPipeline ()
virtual const RegionType &	GetBufferedRegion () const
InternalPixelType *	GetBufferPointer ()
const InternalPixelType *	GetBufferPointer () const
Command *	GetCommand (unsigned long tag)
bool	GetDataReleased () const
bool	GetDebug () const
virtual const DirectionType &	GetDirection ()
virtual const DirectionType &	GetDirection () const
virtual const RegionType &	GetLargestPossibleRegion () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const char *	GetNameOfClass () const
virtual unsigned int	GetNumberOfComponentsPerPixel () const
const OffsetValueType *	GetOffsetTable () const
virtual const PointType &	GetOrigin ()
virtual const PointType &	GetOrigin () const
virtual const unsigned long &	GetPipelineMTime ()
PixelType	GetPixel (const IndexType &index) const
AccessorType &	GetPixelAccessor (void)
const AccessorType &	GetPixelAccessor (void) const
PixelContainerPointer	GetPixelContainer ()
const PixelContainer *	GetPixelContainer () const
virtual int	GetReferenceCount () const
virtual const bool &	GetReleaseDataFlag ()
virtual const RegionType &	GetRequestedRegion () const
SmartPointerForwardReference < ProcessObject >	GetSource () const
unsigned int	GetSourceOutputIndex () const
virtual const SpacingType &	GetSpacing ()
virtual const SpacingType &	GetSpacing () const
virtual unsigned long	GetUpdateMTime () const
virtual void	Graft (const DataObject *data)
bool	HasObserver (const EventObject &event) const
virtual void	Initialize ()
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
PixelType	operator[] (const IndexType &index) const
virtual void	PrepareForNewData ()
void	Print (std::ostream &os, Indent indent=0) const
virtual void	PropagateRequestedRegion () throw (InvalidRequestedRegionError)
virtual void	Register () const
void	ReleaseData ()
virtual void	ReleaseDataFlagOff ()
virtual void	ReleaseDataFlagOn ()
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
virtual bool	RequestedRegionIsOutsideOfTheBufferedRegion ()
virtual void	ResetPipeline ()
virtual void	SetBufferedRegion (const RegionType &region)
virtual void	SetBufferedRegion (const RegionType &region)
void	SetDebug (bool debugFlag) const
virtual void	SetDirection (const DirectionType direction)
virtual void	SetDirection (const DirectionType direction)
virtual void	SetImage (TImage *)
virtual void	SetLargestPossibleRegion (const RegionType &region)
virtual void	SetLargestPossibleRegion (const RegionType &region)
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetNumberOfComponentsPerPixel (unsigned int)
virtual void	SetOrigin (PointType _arg)
virtual void	SetOrigin (const double origin[VImageDimension])
virtual void	SetOrigin (const float origin[VImageDimension])
virtual void	SetOrigin (const PointType values)
virtual void	SetOrigin (const double *values)
virtual void	SetOrigin (const float *values)
void	SetPipelineMTime (unsigned long time)
void	SetPixel (const IndexType &index, const PixelType &value)
void	SetPixelAccessor (const AccessorType &accessor)
void	SetPixelContainer (PixelContainer *container)
virtual void	SetReferenceCount (int)
void	SetReleaseDataFlag (bool flag)
virtual void	SetRequestedRegion (const RegionType &region)
virtual void	SetRequestedRegion (DataObject *data)
virtual void	SetRequestedRegion (const RegionType &region)
virtual void	SetRequestedRegionToLargestPossibleRegion ()
virtual void	SetSpacing (const SpacingType &values)
virtual void	SetSpacing (const double *values)
virtual void	SetSpacing (const float *values)
virtual void	SetSpacing (const SpacingType &spacing)
virtual void	SetSpacing (const double spacing[VImageDimension])
virtual void	SetSpacing (const float spacing[VImageDimension])
bool	ShouldIReleaseData () const
template<class TCoordRep >
void	TransformContinuousIndexToPhysicalPoint (const ContinuousIndex< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &index, Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &point) const
void	TransformContinuousIndexToPhysicalPoint (const ContinuousIndex< TCoordRep, VImageDimension > &index, Point< TCoordRep, VImageDimension > &point) const
template<class TCoordRep >
void	TransformIndexToPhysicalPoint (const IndexType &index, Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &point) const
void	TransformIndexToPhysicalPoint (const IndexType &index, Point< TCoordRep, VImageDimension > &point) const
template<class TCoordRep >
void	TransformLocalVectorToPhysicalVector (const FixedArray< TCoordRep, itkGetStaticConstMacro(ImageDimension) > &inputGradient, FixedArray< TCoordRep, itkGetStaticConstMacro(ImageDimension) > &outputGradient) const
void	TransformLocalVectorToPhysicalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const
template<class TCoordRep >
bool	TransformPhysicalPointToContinuousIndex (const Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &point, ContinuousIndex< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &index) const
	Get the continuous index from a physical point.
bool	TransformPhysicalPointToContinuousIndex (const Point< TCoordRep, VImageDimension > &point, ContinuousIndex< TCoordRep, VImageDimension > &index) const
	Get the continuous index from a physical point.
template<class TCoordRep >
bool	TransformPhysicalPointToIndex (const Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &point, IndexType &index) const
bool	TransformPhysicalPointToIndex (const Point< TCoordRep, VImageDimension > &point, IndexType &index) const
virtual void	UnRegister () const
virtual void	Update ()
virtual void	UpdateOutputData ()
virtual void	UpdateOutputInformation ()
virtual bool	VerifyRequestedRegion ()

Static Public Member Functions
static void	BreakOnError ()
static bool	GetGlobalReleaseDataFlag ()
static bool	GetGlobalWarningDisplay ()
static unsigned int	GetImageDimension ()
static void	GlobalReleaseDataFlagOff ()
static void	GlobalReleaseDataFlagOn ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalReleaseDataFlag (bool val)
static void	SetGlobalWarningDisplay (bool flag)

Static Public Attributes
static const unsigned int	ImageDimension = TImage::ImageDimension

Protected Types
typedef int	InternalReferenceCountType

Protected Member Functions
	ImageAdaptor ()
virtual	~ImageAdaptor ()
virtual void	ComputeIndexToPhysicalPointMatrices ()
void	ComputeOffsetTable ()
virtual void	InitializeBufferedRegion (void)
virtual void	PrintHeader (std::ostream &os, Indent indent) const
bool	PrintObservers (std::ostream &os, Indent indent) const
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual void	PropagateResetPipeline ()

Protected Attributes
DirectionType	m_Direction
DirectionType	m_IndexToPhysicalPoint
PointType	m_Origin
DirectionType	m_PhysicalPointToIndex
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock
SpacingType	m_Spacing

Private Member Functions
	ImageAdaptor (const Self &)
void	operator= (const Self &)

Private Attributes
TImage::Pointer	m_Image
AccessorType	m_PixelAccessor

Detailed Description

template<class TImage, class TAccessor>
class itk::ImageAdaptor< TImage, TAccessor >

Give access to partial aspects of voxels from an Image.

ImageAdaptors are templated over the ImageType and over a functor that will specify what part of the pixel can be accessed

The basic aspects of this class are the types it defines.

Image adaptors can be used as intermediate classes that allow the sending of an image to a filter, specifying what part of the image pixels the filter will act on.

The TAccessor class should implement the Get and Set methods These two will specify how data can be put and get from parts of each pixel. It should define the types ExternalType and InternalType too.

Definition at line 48 of file itkImageAdaptor.h.

Member Typedef Documentation

template<class TImage, class TAccessor>

typedef DefaultPixelAccessorFunctor< Self > itk::ImageAdaptor< TImage, TAccessor >::AccessorFunctorType

typedef of the functor that chooses the appropriate accessor Image or VectorImage.

Definition at line 89 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef TAccessor itk::ImageAdaptor< TImage, TAccessor >::AccessorType

Accessor type that convert data between internal and external representations.

Reimplemented in otb::ShiftScaleImageAdaptor< TImage, TOutputPixelType >.

Definition at line 85 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef SmartPointer<const Self> itk::ImageAdaptor< TImage, TAccessor >::ConstPointer

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 61 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef WeakPointer<const Self> itk::ImageAdaptor< TImage, TAccessor >::ConstWeakPointer

Definition at line 62 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef Superclass::DirectionType itk::ImageAdaptor< TImage, TAccessor >::DirectionType

Direction typedef support. The Direction is a matix of direction cosines that specify the direction between samples.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 118 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef Superclass::IndexType itk::ImageAdaptor< TImage, TAccessor >::IndexType

Index typedef support. An index is used to access pixel values.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Reimplemented in otb::ShiftScaleImageAdaptor< TImage, TOutputPixelType >.

Definition at line 92 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef IndexType::IndexValueType itk::ImageAdaptor< TImage, TAccessor >::IndexValueType

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 93 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef TImage itk::ImageAdaptor< TImage, TAccessor >::InternalImageType

Typedef of unadapted image

Definition at line 65 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef InternalPixelType* itk::ImageAdaptor< TImage, TAccessor >::InternalPixelPointerType

Convenient typedef.

Definition at line 228 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef TAccessor::InternalType itk::ImageAdaptor< TImage, TAccessor >::InternalPixelType

Pixel typedef support. Used to declare pixel type in filters or other operations.

Definition at line 79 of file itkImageAdaptor.h.

typedef int itk::LightObject::InternalReferenceCountType

protectedinherited

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 137 of file itkLightObject.h.

template<class TImage, class TAccessor>

typedef PixelType itk::ImageAdaptor< TImage, TAccessor >::IOPixelType

Reimplemented in itk::VectorImageToImageAdaptor< TPixelType, Dimension >.

Definition at line 81 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef Superclass::OffsetType itk::ImageAdaptor< TImage, TAccessor >::OffsetType

Offset typedef support.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 100 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef OffsetType::OffsetValueType itk::ImageAdaptor< TImage, TAccessor >::OffsetValueType

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 101 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef TImage::PixelContainer itk::ImageAdaptor< TImage, TAccessor >::PixelContainer

PixelContainer typedef support. Used to construct a container for the pixel data.

Reimplemented in itk::VectorImageToImageAdaptor< TPixelType, Dimension >, itk::RGBToVectorImageAdaptor< TImage >, itk::VectorToRGBImageAdaptor< TImage >, and otb::VectorImageToASImageAdaptor< TImage >.

Definition at line 200 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef TImage::PixelContainerConstPointer itk::ImageAdaptor< TImage, TAccessor >::PixelContainerConstPointer

Reimplemented in itk::VectorImageToImageAdaptor< TPixelType, Dimension >, itk::RGBToVectorImageAdaptor< TImage >, itk::VectorToRGBImageAdaptor< TImage >, and otb::VectorImageToASImageAdaptor< TImage >.

Definition at line 202 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef TImage::PixelContainerPointer itk::ImageAdaptor< TImage, TAccessor >::PixelContainerPointer

Reimplemented in itk::VectorImageToImageAdaptor< TPixelType, Dimension >, itk::RGBToVectorImageAdaptor< TImage >, itk::VectorToRGBImageAdaptor< TImage >, and otb::VectorImageToASImageAdaptor< TImage >.

Definition at line 201 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef TAccessor::ExternalType itk::ImageAdaptor< TImage, TAccessor >::PixelType

Pixel typedef support. Used to declare pixel type in filters or other operations.

Reimplemented in otb::ShiftScaleImageAdaptor< TImage, TOutputPixelType >, and itk::AddImageAdaptor< TImage >.

Definition at line 71 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef SmartPointer<Self> itk::ImageAdaptor< TImage, TAccessor >::Pointer

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 60 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef Superclass::PointType itk::ImageAdaptor< TImage, TAccessor >::PointType

Origin typedef support. The origin is the geometric coordinates of the index (0,0).

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 113 of file itkImageAdaptor.h.

typedef double itk::ImageBase< VImageDimension >::PointValueType

inherited

Origin typedef support. The origin is the geometric coordinates of the index (0,0).

Definition at line 133 of file itkImageBase.h.

template<class TImage, class TAccessor>

typedef Superclass::RegionType itk::ImageAdaptor< TImage, TAccessor >::RegionType

Region typedef support. A region is used to specify a subset of an image.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 105 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef ImageAdaptor itk::ImageAdaptor< TImage, TAccessor >::Self

Standard class typedefs.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 58 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef Superclass::SizeType itk::ImageAdaptor< TImage, TAccessor >::SizeType

Size typedef support. A size is used to define region bounds.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 96 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef SizeType::SizeValueType itk::ImageAdaptor< TImage, TAccessor >::SizeValueType

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 97 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

typedef Superclass::SpacingType itk::ImageAdaptor< TImage, TAccessor >::SpacingType

Spacing typedef support. Spacing holds the size of a pixel. The spacing is the geometric distance between image samples.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 109 of file itkImageAdaptor.h.

typedef double itk::ImageBase< VImageDimension >::SpacingValueType

inherited

Spacing typedef support. Spacing holds the size of a pixel. The spacing is the geometric distance between image samples. ITK only supports positive spacing value: negative values may cause undesirable results.

Definition at line 128 of file itkImageBase.h.

template<class TImage, class TAccessor>

typedef ImageBase<itkGetStaticConstMacro(ImageDimension)> itk::ImageAdaptor< TImage, TAccessor >::Superclass

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 59 of file itkImageAdaptor.h.

Constructor & Destructor Documentation

template<class TImage , class TAccessor >

itk::ImageAdaptor< TImage, TAccessor >::ImageAdaptor ( )

protected

Constructor

Definition at line 30 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

itk::ImageAdaptor< TImage, TAccessor >::~ImageAdaptor ( )

protectedvirtual

Destructor

Definition at line 45 of file itkImageAdaptor.txx.

template<class TImage, class TAccessor>

itk::ImageAdaptor< TImage, TAccessor >::ImageAdaptor ( const Self & )

private

Member Function Documentation

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *	cmd
	)

inherited

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

Definition at line 389 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), itk::ProgressAccumulator::RegisterInternalFilter(), otb::ImageFileWriter< TInputImage >::Update(), and otb::WriterWatcherBase::WriterWatcherBase().

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *	cmd
	)		const

inherited

Definition at line 401 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

template<class TImage, class TAccessor>

void itk::ImageAdaptor< TImage, TAccessor >::Allocate ( )

inlinevirtual

Allocate the image memory. Dimension and Size must be set a priori.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 170 of file itkImageAdaptor.h.

void itk::LightObject::BreakOnError ( )

staticinherited

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

Definition at line 149 of file itkLightObject.cxx.

template<class TImage , class TAccessor >

ImageAdaptor< TImage, TAccessor >::IndexType itk::ImageAdaptor< TImage, TAccessor >::ComputeIndex ( OffsetValueType offset ) const

Compute Index given an Offset

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 137 of file itkImageAdaptor.txx.

virtual void itk::ImageBase< VImageDimension >::ComputeIndexToPhysicalPointMatrices ( )

protectedvirtualinherited

Compute helper matrices used to transform Index coordinates to PhysicalPoint coordinates and back. This method is virtual and will be overloaded in derived classes in order to provide backward compatibility behavior in classes that did not used to take image orientation into account.

OffsetValueType itk::ImageBase< VImageDimension >::ComputeOffset ( const IndexType & ind ) const

inlineinherited

Compute an offset from the beginning of the buffer for a pixel at the specified index. The index is not checked as to whether it is inside the current buffer, so the computed offset could conceivably be outside the buffer. If bounds checking is needed, one can call ImageRegion::IsInside(ind) on the BufferedRegion prior to calling ComputeOffset.

Definition at line 293 of file itkImageBase.h.

References itk::Index< VIndexDimension >::GetIndex().

void itk::ImageBase< VImageDimension >::ComputeOffsetTable ( )

protectedinherited

Calculate the offsets needed to move from one pixel to the next along a row, column, slice, volume, etc. These offsets are based on the size of the BufferedRegion. This should be called after the BufferedRegion is set.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::CopyInformation ( const DataObject * data )

virtual

Copy information from the specified data set. This method is part of the pipeline execution model. By default, a ProcessObject will copy meta-data from the first input to all of its outputs. See ProcessObject::GenerateOutputInformation(). Each subclass of DataObject is responsible for being able to copy whatever meta-data it needs from from another DataObject. ImageBase has more meta-data than its DataObject. Thus, it must provide its own version of CopyInformation() in order to copy the LargestPossibleRegion from the input parameter.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 210 of file itkImageAdaptor.txx.

template<class TImage, class TAccessor>

virtual::itk::LightObject::Pointer itk::ImageAdaptor< TImage, TAccessor >::CreateAnother ( void ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

void itk::DataObject::DataHasBeenGenerated ( )

inherited

Inform the pipeline mechanism that data has been generated. This method is called by ProcessObject::UpdateOutputData() once the process object has finished generating its data. This essentially marks the DataObject as being updated and ready for use.

Definition at line 428 of file itkDataObject.cxx.

void itk::Object::DebugOff ( ) const

virtualinherited

Turn debugging output off.

Definition at line 253 of file itkObject.cxx.

void itk::Object::DebugOn ( ) const

virtualinherited

Turn debugging output on.

Definition at line 242 of file itkObject.cxx.

void itk::LightObject::Delete ( )

virtualinherited

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

Delete a itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C++ delete method will not work with reference counting.

Definition at line 88 of file itkLightObject.cxx.

void itk::DataObject::DisconnectPipeline ( )

inherited

Separate this data object from the pipeline. This routine disconnects a data object from the upstream pipeline. Hence an Update() from downstream will not propagate back past this data object. To completely isolate this data object from the pipeline, the application must remove this data object from any filters which it is connected as the input.

Definition at line 216 of file itkDataObject.cxx.

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::RegionType & itk::ImageAdaptor< TImage, TAccessor >::GetBufferedRegion ( void ) const

virtual

Get the region object that defines the size and starting index of the region of the image currently loaded in memory. This method overloads the one in ImageBase in order to delegate to the adapted image.

See also:: ImageRegion, SetLargestPossibleRegion(), SetRequestedRegion()

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 388 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

ImageAdaptor< TImage, TAccessor >::InternalPixelType * itk::ImageAdaptor< TImage, TAccessor >::GetBufferPointer ( )

Return a pointer to the beginning of the buffer. This is used by the image iterator class.

Definition at line 341 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::InternalPixelType * itk::ImageAdaptor< TImage, TAccessor >::GetBufferPointer ( ) const

Definition at line 332 of file itkImageAdaptor.txx.

Command * itk::Object::GetCommand ( unsigned long tag )

inherited

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

Definition at line 414 of file itkObject.cxx.

References itk::Object::GetCommand(), and NULL.

Referenced by itk::Object::GetCommand().

bool itk::DataObject::GetDataReleased ( ) const

inlineinherited

Get the flag indicating the data has been released.

Definition at line 332 of file itkDataObject.h.

bool itk::Object::GetDebug ( ) const

inherited

Get the value of the debug flag.

Definition at line 264 of file itkObject.cxx.

Referenced by otb::ogr::ImageReference< double >::GetDebug().

virtual const DirectionType& itk::ImageBase< VImageDimension >::GetDirection ( void )

virtualinherited

Get the direction cosines of the image. The direction cosines are vectors that point from one pixel to the next. For ImageBase and Image, the default direction is identity.

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::DirectionType & itk::ImageAdaptor< TImage, TAccessor >::GetDirection ( void ) const

virtual

Get the direction cosines of the image. The direction cosines are vectors that point from one pixel to the next. For ImageBase and Image, the default direction is identity.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 311 of file itkImageAdaptor.txx.

bool itk::DataObject::GetGlobalReleaseDataFlag ( )

staticinherited

Definition at line 189 of file itkDataObject.cxx.

bool itk::Object::GetGlobalWarningDisplay ( )

staticinherited

Get the value of the global debug output control flag.

Definition at line 381 of file itkObject.cxx.

static unsigned int itk::ImageBase< VImageDimension >::GetImageDimension ( )

inlinestaticinherited

Image dimension. The dimension of an image is fixed at construction.

Definition at line 145 of file itkImageBase.h.

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::RegionType & itk::ImageAdaptor< TImage, TAccessor >::GetLargestPossibleRegion ( void ) const

virtual

Get the region object that defines the size and starting index for the largest possible region this image could represent. This is used in determining how much memory would be needed to load an entire dataset. It is also used to determine boundary conditions. This method overloads the one in ImageBase in order to delegate to the adapted image.

See also:: ImageRegion, GetBufferedRegion(), GetRequestedRegion()

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 411 of file itkImageAdaptor.txx.

MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void )

inherited

Returns:: A reference to this objects MetaDataDictionary.

Warning:: This reference may be changed.

Reimplemented in otb::ImageMetadataInterfaceBase.

Definition at line 532 of file itkObject.cxx.

References NULL.

const MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void ) const

inherited

Returns:: A constant reference to this objects MetaDataDictionary.

Reimplemented in otb::ImageMetadataInterfaceBase.

Definition at line 543 of file itkObject.cxx.

References NULL.

template<class TImage , class TAccessor >

unsigned long itk::ImageAdaptor< TImage, TAccessor >::GetMTime ( void ) const

virtual

Delegate GetMTime to the Internal Image

Reimplemented from itk::Object.

Definition at line 361 of file itkImageAdaptor.txx.

template<class TImage, class TAccessor>

virtual const char* itk::ImageAdaptor< TImage, TAccessor >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

virtual unsigned int itk::ImageBase< VImageDimension >::GetNumberOfComponentsPerPixel ( ) const

virtualinherited

INTERNAL This method is used internally by filters to copy meta-data from the output to the input. Users should not have a need to use this method.

Filters that override the ProcessObject's GenerateOutputInformation() should generally have the following line if they want to propagate meta- data for both Image and VectorImage

outputImage->SetNumberOfComponentsPerPixel(

inputImage->GetNumberOfComponentsPerPixel() )

See also:: ImageBase, VectorImage

Returns/Sets the number of components in the image. Note that for all images this is 1. Even for Image< RGBPixel< T >, 3 >. This is >= 1 only for time-series images such as itk::VectorImage.

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::OffsetValueType * itk::ImageAdaptor< TImage, TAccessor >::GetOffsetTable ( void ) const

Get the OffsetTable from the adapted image

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 128 of file itkImageAdaptor.txx.

virtual const PointType& itk::ImageBase< VImageDimension >::GetOrigin ( void )

virtualinherited

Get the origin of the image. The origin is the geometric coordinates of the index (0,0). The value returned is a pointer to a double array. For ImageBase and Image, the default origin is 0.

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::PointType & itk::ImageAdaptor< TImage, TAccessor >::GetOrigin ( void ) const

virtual

Get the origin of the image. The origin is the geometric coordinates of the image origin.

See also:: SetOrigin()

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 292 of file itkImageAdaptor.txx.

virtual const unsigned long& itk::DataObject::GetPipelineMTime ( )

virtualinherited

Referenced by itk::ProcessObject::UpdateOutputInformation().

template<class TImage, class TAccessor>

PixelType itk::ImageAdaptor< TImage, TAccessor >::GetPixel ( const IndexType & index ) const

inline

Get a pixel (read only version)

Definition at line 185 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

AccessorType& itk::ImageAdaptor< TImage, TAccessor >::GetPixelAccessor ( void )

inline

Return the Data Accesor object

Definition at line 273 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

const AccessorType& itk::ImageAdaptor< TImage, TAccessor >::GetPixelAccessor ( void ) const

inline

Return the Data Accesor object

Definition at line 277 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

PixelContainerPointer itk::ImageAdaptor< TImage, TAccessor >::GetPixelContainer ( )

inline

Return a pointer to the container.

Definition at line 205 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

const PixelContainer* itk::ImageAdaptor< TImage, TAccessor >::GetPixelContainer ( ) const

inline

Definition at line 208 of file itkImageAdaptor.h.

virtual int itk::LightObject::GetReferenceCount ( ) const

inlinevirtualinherited

Gets the reference count on this object.

Definition at line 105 of file itkLightObject.h.

virtual const bool& itk::DataObject::GetReleaseDataFlag ( )

virtualinherited

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::RegionType & itk::ImageAdaptor< TImage, TAccessor >::GetRequestedRegion ( void ) const

virtual

Get the region object that defines the size and starting index for the region of the image requested (i.e., the region of the image to be operated on by a filter). This method overloads the one in ImageBase in order to delegate to the adapted image.

See also:: ImageRegion, SetLargestPossibleRegion(), SetBufferedRegion()

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 460 of file itkImageAdaptor.txx.

SmartPointerForwardReference< ProcessObject > itk::DataObject::GetSource ( void ) const

inherited

Get the process object that generated this data object. If there is no process object, then the data object has been disconnected from the pipeline, or the data object was created manually. (Note: we cannot use the GetObjectMacro() defined in itkMacro because the mutual dependency of DataObject and ProcessObject causes compile problems. Also, a forward reference smart pointer is returned, not a smart pointer, because of the circular dependency between the process and data object.)

GetSource() returns a SmartPointerForwardReference and not a WeakPointer because it is assumed the code calling GetSource() wants to hold a long term reference to the source.

Definition at line 288 of file itkDataObject.cxx.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

unsigned int itk::DataObject::GetSourceOutputIndex ( ) const

inherited

Which of the source's outputs corresponds to this data object?

Definition at line 296 of file itkDataObject.cxx.

Referenced by itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >::GenerateOutputRequestedRegion().

virtual const SpacingType& itk::ImageBase< VImageDimension >::GetSpacing ( void )

virtualinherited

Get the spacing (size of a pixel) `of the image. The spacing is the geometric distance between image samples. The value returned is a pointer to a double array. For ImageBase and Image, the default data spacing is unity.

template<class TImage , class TAccessor >

const ImageAdaptor< TImage, TAccessor >::SpacingType & itk::ImageAdaptor< TImage, TAccessor >::GetSpacing ( void ) const

virtual

Get the spacing (size of a pixel) of the image. The spacing is the geometric distance between image samples.

See also:: SetSpacing()

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 223 of file itkImageAdaptor.txx.

unsigned long itk::DataObject::GetUpdateMTime ( ) const

virtualinherited

MTime for the last time this DataObject was generated.

Definition at line 438 of file itkDataObject.cxx.

static void itk::DataObject::GlobalReleaseDataFlagOff ( )

inlinestaticinherited

Definition at line 318 of file itkDataObject.h.

static void itk::DataObject::GlobalReleaseDataFlagOn ( )

inlinestaticinherited

Definition at line 316 of file itkDataObject.h.

static void itk::Object::GlobalWarningDisplayOff ( )

inlinestaticinherited

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

Referenced by itk::OutputWindow::DisplayText(), itk::Win32OutputWindow::PromptText(), and itk::Win32OutputWindow::WndProc().

static void itk::Object::GlobalWarningDisplayOn ( )

inlinestaticinherited

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::Graft ( const DataObject * data )

virtual

Graft the data and information from one image to another. This is a convenience method to setup a second image with all the meta information of another image and use the same pixel container. Note that this method is different than just using two SmartPointers to the same image since separate DataObjects are still maintained. This method is similar to ImageSource::GraftOutput(). The implementation in ImageBase simply calls CopyInformation() and copies the region ivars. The implementation here refers to the superclass' implementation and then copies over the pixel container.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 78 of file itkImageAdaptor.txx.

bool itk::Object::HasObserver ( const EventObject & event ) const

inherited

Return true if an observer is registered for this event.

Definition at line 467 of file itkObject.cxx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::Initialize ( void )

virtual

Restore the data object to its initial state. This means releasing memory.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 53 of file itkImageAdaptor.txx.

virtual void itk::ImageBase< VImageDimension >::InitializeBufferedRegion ( void )

protectedvirtualinherited

Restores the buffered region to it's default state This method does not call Modify because Initialization is called by ReleaseData and can not modify the MTime

See also:: ReleaseData, Initialize, SetBufferedRegion

void itk::Object::InvokeEvent ( const EventObject & event )

inherited

Call Execute on all the Commands observing this event id.

Definition at line 446 of file itkObject.cxx.

Referenced by otb::Wrapper::Application::AddProcess(), itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback(), and itk::VTKImageExportBase::UpdateDataCallback().

void itk::Object::InvokeEvent ( const EventObject & event ) const

inherited

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

Definition at line 457 of file itkObject.cxx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::Modified ( void ) const

virtual

Delegate Modified to the Internal Image

Reimplemented from itk::Object.

Definition at line 350 of file itkImageAdaptor.txx.

template<class TImage, class TAccessor>

static Pointer itk::ImageAdaptor< TImage, TAccessor >::New ( )

static

Method for creation through the object factory.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

template<class TImage, class TAccessor>

void itk::ImageAdaptor< TImage, TAccessor >::operator= ( const Self & )

private

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

template<class TImage, class TAccessor>

PixelType itk::ImageAdaptor< TImage, TAccessor >::operator[] ( const IndexType & index ) const

inline

Access a pixel. This version can only be an rvalue.

Definition at line 189 of file itkImageAdaptor.h.

virtual void itk::DataObject::PrepareForNewData ( )

inlinevirtualinherited

Setup a DataObject to receive new data. This method is called by the pipeline mechanism on each output of filter that needs to execute. The default implementation is to return a DataObject to its initial state. This may involve releasing previously allocated bulk data. Subclasses of DataObject may want to override this method and/or the Initialize() method if they want a different default behavior (for instance a DataObject might want finer control over its bulk data memory management).

Definition at line 385 of file itkDataObject.h.

void itk::LightObject::Print	(	std::ostream &	os,
		Indent	indent = `0`
	)		const

inherited

Cause the object to print itself out.

Avoid DLL boundary problems. This function will be common to all itk objects. It just calls the header/self/trailer virtual print methods, which can be overriden by subclasses (any itk object).

Definition at line 135 of file itkLightObject.cxx.

References itk::Indent::GetNextIndent().

Referenced by itk::operator<<().

void itk::LightObject::PrintHeader	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtualinherited

Define a default print header for all objects.

Definition at line 320 of file itkLightObject.cxx.

bool itk::Object::PrintObservers	(	std::ostream &	os,
		Indent	indent
	)		const

protectedinherited

Definition at line 478 of file itkObject.cxx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Chaining method to print an object's instance variables, as well as its superclasses.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 119 of file itkImageAdaptor.txx.

void itk::LightObject::PrintTrailer	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtualinherited

Define a default print trailer for all objects.

Definition at line 331 of file itkLightObject.cxx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::PropagateRequestedRegion ( void ) throw (InvalidRequestedRegionError)

virtual

Methods to update the pipeline. Called internally by the pipeline mechanism.

Reimplemented from itk::DataObject.

Definition at line 184 of file itkImageAdaptor.txx.

void itk::DataObject::PropagateResetPipeline ( )

protectedvirtualinherited

Propagate a call to ResetPipeline(). Called only from ProcessObject.

Definition at line 367 of file itkDataObject.cxx.

void itk::Object::Register ( ) const

virtualinherited

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

Definition at line 309 of file itkObject.cxx.

Referenced by itk::ObjectFactoryBase::RegisterFactory().

void itk::DataObject::ReleaseData ( )

inherited

Release data back to system to conserve memory resource. Used during pipeline execution. Releasing this data does not make down-stream data invalid, so it does not modify the MTime of this data object.

Definition at line 197 of file itkDataObject.cxx.

virtual void itk::DataObject::ReleaseDataFlagOff ( )

virtualinherited

virtual void itk::DataObject::ReleaseDataFlagOn ( )

virtualinherited

void itk::Object::RemoveAllObservers ( )

inherited

Remove all observers .

Definition at line 435 of file itkObject.cxx.

void itk::Object::RemoveObserver ( unsigned long tag )

inherited

Remove the observer with this tag value.

Definition at line 425 of file itkObject.cxx.

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), and otb::ImageFileWriter< TInputImage >::Update().

virtual bool itk::ImageBase< VImageDimension >::RequestedRegionIsOutsideOfTheBufferedRegion ( )

virtualinherited

Determine whether the RequestedRegion is outside of the BufferedRegion. This method returns true if the RequestedRegion is outside the BufferedRegion (true if at least one pixel is outside). This is used by the pipeline mechanism to determine whether a filter needs to re-execute in order to satisfy the current request. If the current RequestedRegion is already inside the BufferedRegion from the previous execution (and the current filter is up to date), then a given filter does not need to re-execute

Reimplemented from itk::DataObject.

void itk::DataObject::ResetPipeline ( )

virtualinherited

Reset the pipeline. If an exception is thrown during an Update(), the pipeline may be in an inconsistent state. This method clears the internal state of the pipeline so Update() can be called.

Definition at line 360 of file itkDataObject.cxx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetBufferedRegion ( const RegionType & region )

virtual

Set the region object that defines the size and starting index of the region of the image currently load in memory.

See also:: ImageRegion, SetLargestPossibleRegion(), SetRequestedRegion()

Definition at line 375 of file itkImageAdaptor.txx.

virtual void itk::ImageBase< VImageDimension >::SetBufferedRegion ( const RegionType & region )

virtualinherited

Set the region object that defines the size and starting index of the region of the image currently loaded in memory.

See also:: ImageRegion, SetLargestPossibleRegion(), SetRequestedRegion()

void itk::Object::SetDebug ( bool debugFlag ) const

inherited

Set the value of the debug flag. A non-zero value turns debugging on.

Definition at line 275 of file itkObject.cxx.

virtual void itk::ImageBase< VImageDimension >::SetDirection ( const DirectionType direction )

virtualinherited

Set the direction cosines of the image. The direction cosines are vectors that point from one pixel to the next.

One row of the matrix indicates the direction cosines of the unit vector that is parallel to the lines of the image grid corresponding to that dimension. For example, and image with Direction matrix

0.866 0.500 -0.500 0.866

has an image grid were the fastest changing index (dimension[0]) walks over a line that in Physical space is oriented parallel to the vector (0.866,0.5). The second fastest changing index (dimension[1]) walks along a line that in Physical space is oriented parallel to the vector (-0.5,0.866)

The vectors whose direction cosines are stored in the Direction matrix, are expected to be orthogonal to each other, and they are expected to form a right handed coordinate system, but this is not checked nor enforced in the itk::ImageBase.

For details, please see:

http://www.itk.org/Wiki/Proposals:Orientation#Some_notes_on_the_DICOM_convention_and_current_ITK_usage

See also:: GetDirection()

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetDirection ( const DirectionType direction )

virtual

Set the direction of the image.

Definition at line 301 of file itkImageAdaptor.txx.

void itk::DataObject::SetGlobalReleaseDataFlag ( bool val )

staticinherited

Turn on/off a flag to control whether every object releases its data after being used by a filter. Being a global flag, it controls the behavior of all DataObjects and ProcessObjects.

Definition at line 177 of file itkDataObject.cxx.

void itk::Object::SetGlobalWarningDisplay ( bool val )

staticinherited

This is a global flag that controls whether any debug, warning or error messages are displayed.

Set the value of the global debug output control flag.

Definition at line 370 of file itkObject.cxx.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<class TImage, class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetImage ( TImage * image )

virtual

Set Internal Image

Definition at line 320 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetLargestPossibleRegion ( const RegionType & region )

virtual

Set the region object that defines the size and starting index for the largest possible region this image could represent. This is used in determining how much memory would be needed to load an entire dataset. It is also used to determine boundary conditions.

See also:: ImageRegion, SetBufferedRegion(), SetRequestedRegion()

Definition at line 398 of file itkImageAdaptor.txx.

virtual void itk::ImageBase< VImageDimension >::SetLargestPossibleRegion ( const RegionType & region )

virtualinherited

Set the region object that defines the size and starting index for the largest possible region this image could represent. This is used in determining how much memory would be needed to load an entire dataset. It is also used to determine boundary conditions.

See also:: ImageRegion, SetBufferedRegion(), SetRequestedRegion()

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary & rhs )

inherited

Returns:: Set the MetaDataDictionary

Reimplemented in otb::ImageMetadataInterfaceBase.

Definition at line 554 of file itkObject.cxx.

References NULL.

Referenced by otb::VectorImage< TPixel, VImageDimension >::CopyInformation(), and otb::Image< TPixel, VImageDimension >::CopyInformation().

virtual void itk::ImageBase< VImageDimension >::SetNumberOfComponentsPerPixel ( unsigned int )

virtualinherited

virtual void itk::ImageBase< VImageDimension >::SetOrigin ( PointType _arg )

virtualinherited

Set the origin of the image. The origin is the geometric coordinates of the image origin. It is stored internally as double but may be set from float.

See also:: GetOrigin()

virtual void itk::ImageBase< VImageDimension >::SetOrigin ( const double origin[VImageDimension] )

virtualinherited

virtual void itk::ImageBase< VImageDimension >::SetOrigin ( const float origin[VImageDimension] )

virtualinherited

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetOrigin ( const PointType values )

virtual

Set the origin of the image.

Definition at line 262 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetOrigin ( const double * values )

virtual

Definition at line 272 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetOrigin ( const float * values )

virtual

Definition at line 282 of file itkImageAdaptor.txx.

void itk::DataObject::SetPipelineMTime ( unsigned long time )

inlineinherited

The maximum MTime of all upstream filters and data objects. This does not include the MTime of this data object.

Definition at line 370 of file itkDataObject.h.

Referenced by itk::ProcessObject::UpdateOutputInformation().

template<class TImage, class TAccessor>

void itk::ImageAdaptor< TImage, TAccessor >::SetPixel	(	const IndexType &	index,
		const PixelType &	value
	)

inline

Set a pixel.

Definition at line 181 of file itkImageAdaptor.h.

template<class TImage, class TAccessor>

void itk::ImageAdaptor< TImage, TAccessor >::SetPixelAccessor ( const AccessorType & accessor )

inline

Sets the Data Accesor object

Definition at line 281 of file itkImageAdaptor.h.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetPixelContainer ( PixelContainer * container )

Set the container to use. Note that this does not cause the DataObject to be modified.

Definition at line 65 of file itkImageAdaptor.txx.

void itk::Object::SetReferenceCount ( int ref )

virtualinherited

Sets the reference count (use with care)

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 347 of file itkObject.cxx.

void itk::DataObject::SetReleaseDataFlag ( bool flag )

inlineinherited

Turn on/off a flag to control whether this object's data is released after being used by a filter.

Definition at line 304 of file itkDataObject.h.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetRequestedRegion ( const RegionType & region )

virtual

Set the region object that defines the size and starting index for the region of the image requested.

See also:: ImageRegion, SetLargestPossibleRegion(), SetBufferedRegion()

Definition at line 421 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetRequestedRegion ( DataObject * data )

virtual

Set the requested region from this data object to match the requested region of the data object passed in as a parameter. This method implements the API from DataObject. The data object parameter must be castable to an ImageBase.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 434 of file itkImageAdaptor.txx.

virtual void itk::ImageBase< VImageDimension >::SetRequestedRegion ( const RegionType & region )

virtualinherited

Set the region object that defines the size and starting index for the region of the image requested (i.e., the region of the image to be operated on by a filter). Setting the RequestedRegion does not cause the object to be modified. This method is called internally by the pipeline and therefore bypasses the modified time calculation.

See also:: ImageRegion, SetLargestPossibleRegion(), SetBufferedRegion()

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetRequestedRegionToLargestPossibleRegion ( )

virtual

Set the RequestedRegion to the LargestPossibleRegion. This forces a filter to produce all of the output in one execution (i.e. not streaming) on the next call to Update().

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 197 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetSpacing ( const SpacingType & values )

virtual

Set the spacing (size of a pixel) of the image.

Definition at line 232 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetSpacing ( const double * values )

virtual

Definition at line 242 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::SetSpacing ( const float * values )

virtual

Definition at line 252 of file itkImageAdaptor.txx.

virtual void itk::ImageBase< VImageDimension >::SetSpacing ( const SpacingType & spacing )

virtualinherited

Set the spacing (size of a pixel) of the image. The spacing is the geometric distance between image samples. It is stored internally as double, but may be set from float. These methods also pre-compute the Index to Physical point transforms of the image.

See also:: GetSpacing()

virtual void itk::ImageBase< VImageDimension >::SetSpacing ( const double spacing[VImageDimension] )

virtualinherited

virtual void itk::ImageBase< VImageDimension >::SetSpacing ( const float spacing[VImageDimension] )

virtualinherited

bool itk::DataObject::ShouldIReleaseData ( ) const

inherited

Return flag indicating whether data should be released after use by a filter.

Definition at line 206 of file itkDataObject.cxx.

template<class TImage, class TAccessor>

template<class TCoordRep >

void itk::ImageAdaptor< TImage, TAccessor >::TransformContinuousIndexToPhysicalPoint	(	const ContinuousIndex< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &	index,
		Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &	point
	)		const

inline

Get a physical point (in the space which the origin and spacing infomation comes from) from a continuous index (in the index space)

See also:: Transform

Definition at line 328 of file itkImageAdaptor.h.

void itk::ImageBase< VImageDimension >::TransformContinuousIndexToPhysicalPoint	(	const ContinuousIndex< TCoordRep, VImageDimension > &	index,
		Point< TCoordRep, VImageDimension > &	point
	)		const

inlineinherited

Get a physical point (in the space which the origin and spacing infomation comes from) from a continuous index (in the index space)

See also:: Transform

Definition at line 436 of file itkImageBase.h.

template<class TImage, class TAccessor>

template<class TCoordRep >

void itk::ImageAdaptor< TImage, TAccessor >::TransformIndexToPhysicalPoint	(	const IndexType &	index,
		Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &	point
	)		const

inline

Get a physical point (in the space which the origin and spacing infomation comes from) from a discrete index (in the index space)

See also:: Transform

Definition at line 343 of file itkImageAdaptor.h.

void itk::ImageBase< VImageDimension >::TransformIndexToPhysicalPoint	(	const IndexType &	index,
		Point< TCoordRep, VImageDimension > &	point
	)		const

inlineinherited

Get a physical point (in the space which the origin and spacing infomation comes from) from a discrete index (in the index space)

See also:: Transform

Definition at line 467 of file itkImageBase.h.

template<class TImage, class TAccessor>

template<class TCoordRep >

void itk::ImageAdaptor< TImage, TAccessor >::TransformLocalVectorToPhysicalVector	(	const FixedArray< TCoordRep, itkGetStaticConstMacro(ImageDimension) > &	inputGradient,
		FixedArray< TCoordRep, itkGetStaticConstMacro(ImageDimension) > &	outputGradient
	)		const

inline

Definition at line 352 of file itkImageAdaptor.h.

void itk::ImageBase< VImageDimension >::TransformLocalVectorToPhysicalVector	(	const FixedArray< TCoordRep, VImageDimension > &	inputGradient,
		FixedArray< TCoordRep, VImageDimension > &	outputGradient
	)		const

inlineinherited

Get a physical point (in the space which the origin and spacing infomation comes from) from a discrete index (in the index space)

See also:: Transform Take a vector or covariant vector that has been computed in the coordinate system parallel to the image grid and rotate it by the direction cosines in order to get it in terms of the coordinate system of the image acquisition device. This implementation in the OrientedImage multiply the array (vector or covariant vector) by the matrix of Direction Cosines. The arguments of the method are of type FixedArray to make possible to use this method with both Vector and CovariantVector. The Method is implemented differently in the itk::Image.; Image

Definition at line 501 of file itkImageBase.h.

template<class TImage, class TAccessor>

template<class TCoordRep >

bool itk::ImageAdaptor< TImage, TAccessor >::TransformPhysicalPointToContinuousIndex	(	const Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &	point,
		ContinuousIndex< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &	index
	)		const

inline

Get the continuous index from a physical point.

Returns true if the resulting index is within the image, false otherwise.

See also:: Transform

Definition at line 301 of file itkImageAdaptor.h.

bool itk::ImageBase< VImageDimension >::TransformPhysicalPointToContinuousIndex	(	const Point< TCoordRep, VImageDimension > &	point,
		ContinuousIndex< TCoordRep, VImageDimension > &	index
	)		const

inlineinherited

Get the continuous index from a physical point.

Returns true if the resulting index is within the image, false otherwise.

See also:: Transform

Definition at line 408 of file itkImageBase.h.

template<class TImage, class TAccessor>

template<class TCoordRep >

bool itk::ImageAdaptor< TImage, TAccessor >::TransformPhysicalPointToIndex	(	const Point< TCoordRep, itkGetStaticConstMacro(ImageDimension)> &	point,
		IndexType &	index
	)		const

inline

Get the index (discrete) from a physical point. Floating point index results are truncated to integers. Returns true if the resulting index is within the image, false otherwise

See also:: Transform

Definition at line 315 of file itkImageAdaptor.h.

bool itk::ImageBase< VImageDimension >::TransformPhysicalPointToIndex	(	const Point< TCoordRep, VImageDimension > &	point,
		IndexType &	index
	)		const

inlineinherited

Get the index (discrete) of a voxel from a physical point. Floating point index results are rounded to integers if ITK_USE_CENTERED_PIXEL_COORDINATES_CONSISTENTLY is on and truncated otherwise. Returns true if the resulting index is within the image, false otherwise

See also:: Transform

Definition at line 378 of file itkImageBase.h.

void itk::Object::UnRegister ( ) const

virtualinherited

Decrease the reference count (release by another object).

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 324 of file itkObject.cxx.

Referenced by itk::Object::New(), and itk::ObjectFactoryBase::UnRegisterFactory().

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::Update ( void )

virtual

Return the Data Accesor object

Reimplemented from itk::DataObject.

Definition at line 146 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::UpdateOutputData ( void )

virtual

Overriden from base class to check if the requested image region has zero pixels.

This is needed so that filters can set an input's requested region to zero, to indicate that it does not need to be updated or executed.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 170 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

void itk::ImageAdaptor< TImage, TAccessor >::UpdateOutputInformation ( void )

virtual

Methods to update the pipeline. Called internally by the pipeline mechanism.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 157 of file itkImageAdaptor.txx.

template<class TImage , class TAccessor >

bool itk::ImageAdaptor< TImage, TAccessor >::VerifyRequestedRegion ( )

virtual

Verify that the RequestedRegion is within the LargestPossibleRegion. If the RequestedRegion is not within the LargestPossibleRegion, then the filter cannot possible satisfy the request. This method returns true if the request can be satisfied and returns fails if the request cannot. This method is used by PropagateRequestedRegion(). PropagateRequestedRegion() throws a InvalidRequestedRegionError exception is the requested region is not within the LargestPossibleRegion.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 447 of file itkImageAdaptor.txx.

Member Data Documentation

template<class TImage, class TAccessor>

const unsigned int itk::ImageAdaptor< TImage, TAccessor >::ImageDimension = TImage::ImageDimension

static

Dimension of the image. This constant is used by functions that are templated over image type (as opposed to being templated over pixel type and dimension) when they need compile time access to the dimension of the image.

Reimplemented from itk::ImageBase< ::itk::GetImageDimension< TImage >::ImageDimension >.

Definition at line 55 of file itkImageAdaptor.h.

DirectionType itk::ImageBase< VImageDimension >::m_Direction

protectedinherited

Definition at line 638 of file itkImageBase.h.

template<class TImage, class TAccessor>

TImage::Pointer itk::ImageAdaptor< TImage, TAccessor >::m_Image

private

Definition at line 372 of file itkImageAdaptor.h.

DirectionType itk::ImageBase< VImageDimension >::m_IndexToPhysicalPoint

protectedinherited

Matrices intended to help with the conversion of Index coordinates to PhysicalPoint coordinates

Definition at line 642 of file itkImageBase.h.

PointType itk::ImageBase< VImageDimension >::m_Origin

protectedinherited

Definition at line 637 of file itkImageBase.h.

DirectionType itk::ImageBase< VImageDimension >::m_PhysicalPointToIndex

protectedinherited

Definition at line 643 of file itkImageBase.h.

template<class TImage, class TAccessor>

AccessorType itk::ImageAdaptor< TImage, TAccessor >::m_PixelAccessor

private

Definition at line 376 of file itkImageAdaptor.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount

mutableprotectedinherited

Number of uses of this object by other objects.

Definition at line 141 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock

mutableprotectedinherited

Mutex lock to protect modification to the reference count

Definition at line 144 of file itkLightObject.h.

SpacingType itk::ImageBase< VImageDimension >::m_Spacing

protectedinherited

Origin and spacing of physical coordinates. This variables are protected for efficiency. They are referenced frequently by inner loop calculations.

Definition at line 636 of file itkImageBase.h.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Static Public Attributes

Protected Types

Protected Member Functions

Protected Attributes

Private Member Functions

Private Attributes

Detailed Description

template<class TImage, class TAccessor> class itk::ImageAdaptor< TImage, TAccessor >

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<class TImage, class TAccessor>
class itk::ImageAdaptor< TImage, TAccessor >