#include <otbSOMWithMissingValue.h>

Inheritance diagram for otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >:

Collaboration diagram for otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >:

Public Types
typedef itk::SmartPointer< const Self >	ConstPointer

typedef MapType::DistancePointerType	DistancePointerType

typedef MapType::DistanceType	DistanceType

typedef MapType::IndexType	IndexType

typedef ListSampleType::Pointer	ListSamplePointerType

typedef TListSample	ListSampleType

typedef MapType::Pointer	MapPointerType

typedef TMap	MapType

typedef MapType::PixelType	NeuronType

typedef itk::SmartPointer< Self >	Pointer

typedef MapType::RegionType	RegionType

typedef SOMWithMissingValue	Self

typedef MapType::SizeType	SizeType

typedef PeriodicSOM< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >	Superclass

typedef NeuronType::ValueType	ValueType

Public Types inherited from otb::PeriodicSOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
typedef itk::SmartPointer< const Self >	ConstPointer

typedef MapType::IndexType	IndexType

typedef ListSampleType::Pointer	ListSamplePointerType

typedef TListSample	ListSampleType

typedef MapType::Pointer	MapPointerType

typedef TMap	MapType

typedef MapType::PixelType	NeuronType

typedef itk::SmartPointer< Self >	Pointer

typedef MapType::RegionType	RegionType

typedef PeriodicSOM	Self

typedef MapType::SizeType	SizeType

typedef SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >	Superclass

typedef NeuronType::ValueType	ValueType

Public Types inherited from otb::SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
typedef itk::SmartPointer< const Self >	ConstPointer

typedef MapType::IndexType	IndexType

typedef ListSampleType::Pointer	ListSamplePointerType

typedef TListSample	ListSampleType

typedef MapType::Pointer	MapPointerType

typedef TMap	MapType

typedef MapType::PixelType	NeuronType

typedef itk::SmartPointer< Self >	Pointer

typedef MapType::RegionType	RegionType

typedef SOM	Self

typedef MapType::SizeType	SizeType

typedef Functor::CzihoSOMLearningBehaviorFunctor	SOMLearningBehaviorFunctorType

typedef Functor::CzihoSOMNeighborhoodBehaviorFunctor	SOMNeighborhoodBehaviorFunctorType

typedef itk::ImageSource< TMap >	Superclass

typedef NeuronType::ValueType	ValueType

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const

virtual const char *	GetNameOfClass () const

Public Member Functions inherited from otb::PeriodicSOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
virtual ::itk::LightObject::Pointer	CreateAnother (void) const

virtual const char *	GetNameOfClass () const

Public Member Functions inherited from otb::SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
virtual ::itk::LightObject::Pointer	CreateAnother (void) const

virtual void	SetNumberOfIterations (unsigned int _arg)

virtual unsigned int	GetNumberOfIterations ()

virtual void	SetBetaInit (double _arg)

virtual double	GetBetaInit ()

virtual void	SetBetaEnd (double _arg)

virtual double	GetBetaEnd ()

virtual void	SetMinWeight (ValueType _arg)

virtual ValueType	GetMinWeight ()

virtual void	SetMaxWeight (ValueType _arg)

virtual ValueType	GetMaxWeight ()

virtual void	SetMapSize (SizeType _arg)

virtual SizeType	GetMapSize ()

virtual void	SetNeighborhoodSizeInit (SizeType _arg)

virtual SizeType	GetNeighborhoodSizeInit ()

virtual void	SetRandomInit (bool _arg)

virtual bool	GetRandomInit ()

virtual void	SetSeed (unsigned int _arg)

virtual unsigned int	GetSeed ()

	itkGetObjectMacro (ListSample, ListSampleType)

virtual void	SetListSample (ListSampleType *_arg)

void	SetBetaFunctor (const SOMLearningBehaviorFunctorType &functor)

void	SetNeighborhoodSizeFunctor (const SOMNeighborhoodBehaviorFunctorType &functor)

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from otb::PeriodicSOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
static Pointer	New ()

Static Public Member Functions inherited from otb::SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
static Pointer	New ()

Protected Member Functions
void	AllocateOutputs () override

void	GenerateData (void) override

void	GenerateOutputInformation () override

void	PrintSelf (std::ostream &os, itk::Indent indent) const override

	SOMWithMissingValue ()

void	Step (unsigned int currentIteration) override

void	UpdateMap (const NeuronType &sample, double beta, SizeType &radius) override

	~SOMWithMissingValue () override

Protected Member Functions inherited from otb::PeriodicSOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
void	AllocateOutputs () override

void	GenerateData (void) override

void	GenerateOutputInformation () override

	PeriodicSOM ()

void	PrintSelf (std::ostream &os, itk::Indent indent) const override

void	Step (unsigned int currentIteration) override

void	UpdateMap (const NeuronType &sample, double beta, SizeType &radius) override

	~PeriodicSOM () override

Protected Member Functions inherited from otb::SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
	SOM ()

	~SOM () override

void	GenerateOutputInformation () override

void	AllocateOutputs () override

void	GenerateData (void) override

void	PrintSelf (std::ostream &os, itk::Indent indent) const override

Private Member Functions
void	operator= (const Self &)=delete

	SOMWithMissingValue (const Self &)=delete

Additional Inherited Members
Static Public Attributes inherited from otb::SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >
static const unsigned int	MapDimension

Detailed Description

template<class TListSample, class TMap, class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>
class otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >

This class implements SOM training with missing value.

The distance between vectors that may have missing components is holded by the EuclideanDistanceMetricWithMissingValue class in the SOMMap distance template. Nevertheless, this class re-implements the UpdateMap method to adapt the evaluation of each component of the 'newNeuron' when dealing with missing values.

TMap has to be templeted with EuclideanDistanceMetricWithMissingValuePow2

See also: SOMMap; PeriodicSOM; EuclideanDistanceMetricWithMissingValue

Definition at line 49 of file otbSOMWithMissingValue.h.

Member Typedef Documentation

◆ ConstPointer

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef itk::SmartPointer<const Self> otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::ConstPointer

Definition at line 57 of file otbSOMWithMissingValue.h.

◆ DistancePointerType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef MapType::DistancePointerType otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::DistancePointerType

Definition at line 70 of file otbSOMWithMissingValue.h.

◆ DistanceType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef MapType::DistanceType otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::DistanceType

Definition at line 69 of file otbSOMWithMissingValue.h.

◆ IndexType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef MapType::IndexType otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::IndexType

Definition at line 65 of file otbSOMWithMissingValue.h.

◆ ListSamplePointerType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef ListSampleType::Pointer otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::ListSamplePointerType

Definition at line 60 of file otbSOMWithMissingValue.h.

◆ ListSampleType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef TListSample otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::ListSampleType

Definition at line 59 of file otbSOMWithMissingValue.h.

◆ MapPointerType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef MapType::Pointer otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::MapPointerType

Definition at line 68 of file otbSOMWithMissingValue.h.

◆ MapType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef TMap otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::MapType

Definition at line 62 of file otbSOMWithMissingValue.h.

◆ NeuronType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef MapType::PixelType otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::NeuronType

Definition at line 63 of file otbSOMWithMissingValue.h.

◆ Pointer

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef itk::SmartPointer<Self> otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::Pointer

Definition at line 56 of file otbSOMWithMissingValue.h.

◆ RegionType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef MapType::RegionType otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::RegionType

Definition at line 67 of file otbSOMWithMissingValue.h.

◆ Self

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef SOMWithMissingValue otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::Self

Standard typedefs

Definition at line 54 of file otbSOMWithMissingValue.h.

◆ SizeType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef MapType::SizeType otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::SizeType

Definition at line 66 of file otbSOMWithMissingValue.h.

◆ Superclass

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef PeriodicSOM<TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor> otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::Superclass

Definition at line 55 of file otbSOMWithMissingValue.h.

◆ ValueType

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

typedef NeuronType::ValueType otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::ValueType

Definition at line 64 of file otbSOMWithMissingValue.h.

Constructor & Destructor Documentation

◆ SOMWithMissingValue() [1/2]

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor , class TSOMNeighborhoodBehaviorFunctor >

otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::SOMWithMissingValue

protected

Constructor

Definition at line 34 of file otbSOMWithMissingValue.hxx.

◆ ~SOMWithMissingValue()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor , class TSOMNeighborhoodBehaviorFunctor >

otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::~SOMWithMissingValue

overrideprotected

Destructor

Definition at line 39 of file otbSOMWithMissingValue.hxx.

◆ SOMWithMissingValue() [2/2]

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::SOMWithMissingValue ( const Self & )

privatedelete

Member Function Documentation

◆ AllocateOutputs()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

void otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::AllocateOutputs ( )

inlineoverrideprotected

Output allocation redefinition

Definition at line 92 of file otbSOMWithMissingValue.h.

◆ CreateAnother()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

virtual::itk::LightObject::Pointer otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::CreateAnother ( void ) const

◆ GenerateData()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

void otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::GenerateData ( void )

inlineoverrideprotected

Main computation method

Definition at line 98 of file otbSOMWithMissingValue.h.

◆ GenerateOutputInformation()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

void otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::GenerateOutputInformation ( )

inlineoverrideprotected

Output information redefinition

Definition at line 86 of file otbSOMWithMissingValue.h.

◆ GetNameOfClass()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

virtual const char* otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::GetNameOfClass ( ) const

virtual

Runtime information macro

◆ New()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

static Pointer otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::New ( )

static

Creation through object factory macro

◆ operator=()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

void otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::operator= ( const Self & )

privatedelete

◆ PrintSelf()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor , class TSOMNeighborhoodBehaviorFunctor >

void otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::PrintSelf	(	std::ostream &	os,
		itk::Indent	indent
	)		const

overrideprotected

PrintSelf method

Definition at line 108 of file otbSOMWithMissingValue.hxx.

◆ Step()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor, class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>

void otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::Step ( unsigned int currentIteration )

inlineoverrideprotectedvirtual

Step one iteration.

Reimplemented from otb::SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >.

Definition at line 109 of file otbSOMWithMissingValue.h.

◆ UpdateMap()

template<class TListSample , class TMap , class TSOMLearningBehaviorFunctor , class TSOMNeighborhoodBehaviorFunctor >

void otb::SOMWithMissingValue< TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor >::UpdateMap	(	const NeuronType &	sample,
		double	beta,
		SizeType &	radius
	)

overrideprotectedvirtual

Update the output map with a new sample, depending on the availability of the data

Update the output map with a new sample by including the case when some components of this new sample may be missing.

Parameters

sample	The new sample to learn,
beta	The learning coefficient,
radius	The radius of the nieghbourhood.

Reimplemented from otb::SOM< TListSample, TMap, Functor::CzihoSOMLearningBehaviorFunctor, Functor::CzihoSOMNeighborhoodBehaviorFunctor >.

Definition at line 51 of file otbSOMWithMissingValue.hxx.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Private Member Functions

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ ConstPointer

◆ DistancePointerType

◆ DistanceType

◆ IndexType

◆ ListSamplePointerType

◆ ListSampleType

◆ MapPointerType

◆ MapType

◆ NeuronType

◆ Pointer

◆ RegionType

◆ Self

◆ SizeType

◆ Superclass

◆ ValueType

Constructor & Destructor Documentation

◆ SOMWithMissingValue() [1/2]

◆ ~SOMWithMissingValue()

◆ SOMWithMissingValue() [2/2]

Member Function Documentation

◆ AllocateOutputs()

◆ CreateAnother()

◆ GenerateData()

◆ GenerateOutputInformation()

◆ GetNameOfClass()

◆ New()

◆ operator=()

◆ PrintSelf()

◆ Step()

◆ UpdateMap()